Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.18□□□□□ -0.62
Sox6P40645 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.18□□□□□ -0.62
Sox6P40645 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.18□□□□□ -0.62
Sox6P40645 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.18□□□□□ -0.62
Sox6P40645 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.18□□□□□ -0.62
Sox6P40645 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.18□□□□□ -0.62
Sox6P40645 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.18□□□□□ -0.62
Sox6P40645 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox6P40645 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox6P40645 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox6P40645 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Sox6P40645 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox6P40645 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox6P40645 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox6P40645 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox6P40645 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox6P40645 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox6P40645 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.18□□□□□ -0.62
Sox6P40645 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Sox6P40645 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox6P40645 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox6P40645 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox6P40645 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Sox6P40645 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox6P40645 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox6P40645 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox6P40645 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.17□□□□□ -0.62
Sox6P40645 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox6P40645 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox6P40645 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox6P40645 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox6P40645 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox6P40645 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox6P40645 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.17□□□□□ -0.62
Sox6P40645 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox6P40645 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox6P40645 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox6P40645 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox6P40645 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox6P40645 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox6P40645 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox6P40645 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.17□□□□□ -0.62
Sox6P40645 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox6P40645 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sox6P40645 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sox6P40645 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sox6P40645 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sox6P40645 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sox6P40645 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sox6P40645 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox6P40645 Gm13342-201ENSMUST00000121055 207 ntBASIC11.17□□□□□ -0.62
Sox6P40645 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.17□□□□□ -0.62
Sox6P40645 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Sox6P40645 Gm26956-201ENSMUST00000182176 986 ntBASIC11.17□□□□□ -0.62
Sox6P40645 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.17□□□□□ -0.62
Sox6P40645 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.17□□□□□ -0.62
Sox6P40645 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.17□□□□□ -0.62
Sox6P40645 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.17□□□□□ -0.62
Sox6P40645 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.17□□□□□ -0.62
Sox6P40645 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.17□□□□□ -0.62
Sox6P40645 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.17□□□□□ -0.62
Sox6P40645 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox6P40645 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox6P40645 Gm10076-201ENSMUST00000073238 384 ntBASIC11.17□□□□□ -0.62
Sox6P40645 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox6P40645 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox6P40645 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox6P40645 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox6P40645 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox6P40645 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox6P40645 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox6P40645 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox6P40645 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox6P40645 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sox6P40645 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox6P40645 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox6P40645 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Sox6P40645 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox6P40645 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox6P40645 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox6P40645 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox6P40645 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox6P40645 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox6P40645 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Sox6P40645 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox6P40645 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox6P40645 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox6P40645 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.16□□□□□ -0.62
Sox6P40645 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox6P40645 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Sox6P40645 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox6P40645 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Sox6P40645 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.16□□□□□ -0.62
Sox6P40645 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.16□□□□□ -0.62
Sox6P40645 Gm12314-201ENSMUST00000118104 538 ntBASIC11.16□□□□□ -0.62
Sox6P40645 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.16□□□□□ -0.62
Sox6P40645 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.16□□□□□ -0.62
Sox6P40645 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox6P40645 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.16□□□□□ -0.62
Sox6P40645 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms