Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sftpa1P35242 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sftpa1P35242 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sftpa1P35242 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sftpa1P35242 Gm12783-201ENSMUST00000121425 397 ntBASIC10.98□□□□□ -0.65
Sftpa1P35242 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sftpa1P35242 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC10.98□□□□□ -0.65
Sftpa1P35242 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sftpa1P35242 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sftpa1P35242 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC10.98□□□□□ -0.65
Sftpa1P35242 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sftpa1P35242 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sftpa1P35242 Gm42779-201ENSMUST00000198807 406 ntBASIC10.98□□□□□ -0.65
Sftpa1P35242 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC10.98□□□□□ -0.65
Sftpa1P35242 Gm8574-201ENSMUST00000203207 924 ntBASIC10.98□□□□□ -0.65
Sftpa1P35242 Gm44552-201ENSMUST00000205458 1247 ntBASIC10.98□□□□□ -0.65
Sftpa1P35242 Gm45113-201ENSMUST00000207518 165 ntBASIC10.98□□□□□ -0.65
Sftpa1P35242 Gm2553-201ENSMUST00000215986 605 ntBASIC10.98□□□□□ -0.65
Sftpa1P35242 AC129308.3-201ENSMUST00000225652 524 ntBASIC10.98□□□□□ -0.65
Sftpa1P35242 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sftpa1P35242 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sftpa1P35242 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sftpa1P35242 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sftpa1P35242 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sftpa1P35242 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sftpa1P35242 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sftpa1P35242 Rubie-203ENSMUST00000227803 2430 ntBASIC10.98□□□□□ -0.65
Sftpa1P35242 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Sftpa1P35242 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sftpa1P35242 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sftpa1P35242 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sftpa1P35242 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sftpa1P35242 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sftpa1P35242 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sftpa1P35242 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sftpa1P35242 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sftpa1P35242 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sftpa1P35242 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Sftpa1P35242 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sftpa1P35242 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sftpa1P35242 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
Sftpa1P35242 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.97□□□□□ -0.65
Sftpa1P35242 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.97□□□□□ -0.65
Sftpa1P35242 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Sftpa1P35242 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sftpa1P35242 Gm23272-201ENSMUST00000104053 129 ntBASIC10.97□□□□□ -0.65
Sftpa1P35242 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 Gm8723-201ENSMUST00000166076 820 ntBASIC10.97□□□□□ -0.65
Sftpa1P35242 Gm8701-201ENSMUST00000169259 874 ntBASIC10.97□□□□□ -0.65
Sftpa1P35242 Gm5706-201ENSMUST00000181525 993 ntBASIC10.97□□□□□ -0.65
Sftpa1P35242 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC10.97□□□□□ -0.65
Sftpa1P35242 Gm18204-201ENSMUST00000209835 793 ntBASIC10.97□□□□□ -0.65
Sftpa1P35242 Gm18706-201ENSMUST00000210053 1066 ntBASIC10.97□□□□□ -0.65
Sftpa1P35242 n-R5s185-201ENSMUST00000083953 119 ntBASIC10.97□□□□□ -0.65
Sftpa1P35242 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sftpa1P35242 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 Gm6655-201ENSMUST00000201932 1309 ntBASIC10.97□□□□□ -0.65
Sftpa1P35242 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.97□□□□□ -0.65
Sftpa1P35242 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Sftpa1P35242 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.97□□□□□ -0.65
Sftpa1P35242 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
Sftpa1P35242 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sftpa1P35242 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Sftpa1P35242 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sftpa1P35242 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.97□□□□□ -0.65
Sftpa1P35242 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sftpa1P35242 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Sftpa1P35242 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sftpa1P35242 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sftpa1P35242 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Sftpa1P35242 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sftpa1P35242 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sftpa1P35242 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sftpa1P35242 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms