Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Slc6a11P31650 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.32□□□□□ -0.6
Slc6a11P31650 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Slc6a11P31650 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a11P31650 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a11P31650 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a11P31650 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a11P31650 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a11P31650 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a11P31650 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a11P31650 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a11P31650 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a11P31650 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.31□□□□□ -0.6
Slc6a11P31650 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Slc6a11P31650 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a11P31650 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a11P31650 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.31□□□□□ -0.6
Slc6a11P31650 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a11P31650 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Slc6a11P31650 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a11P31650 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.31□□□□□ -0.6
Slc6a11P31650 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.31□□□□□ -0.6
Slc6a11P31650 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a11P31650 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a11P31650 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a11P31650 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a11P31650 Gm7857-201ENSMUST00000117957 358 ntBASIC11.31□□□□□ -0.6
Slc6a11P31650 Gm12217-201ENSMUST00000118858 696 ntBASIC11.31□□□□□ -0.6
Slc6a11P31650 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a11P31650 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Slc6a11P31650 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Slc6a11P31650 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.31□□□□□ -0.6
Slc6a11P31650 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.31□□□□□ -0.6
Slc6a11P31650 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a11P31650 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.31□□□□□ -0.6
Slc6a11P31650 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.31□□□□□ -0.6
Slc6a11P31650 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Slc6a11P31650 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.31□□□□□ -0.6
Slc6a11P31650 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Slc6a11P31650 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a11P31650 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a11P31650 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.31□□□□□ -0.6
Slc6a11P31650 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.31□□□□□ -0.6
Slc6a11P31650 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a11P31650 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Slc6a11P31650 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a11P31650 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.31□□□□□ -0.6
Slc6a11P31650 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a11P31650 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a11P31650 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a11P31650 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.3□□□□□ -0.6
Slc6a11P31650 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Slc6a11P31650 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.3□□□□□ -0.6
Slc6a11P31650 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Slc6a11P31650 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.3□□□□□ -0.6
Slc6a11P31650 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Slc6a11P31650 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Slc6a11P31650 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
Slc6a11P31650 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.3□□□□□ -0.6
Slc6a11P31650 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.3□□□□□ -0.6
Slc6a11P31650 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.3□□□□□ -0.6
Slc6a11P31650 Gm13316-201ENSMUST00000140537 691 ntBASIC11.3□□□□□ -0.6
Slc6a11P31650 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.3□□□□□ -0.6
Slc6a11P31650 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
Slc6a11P31650 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.3□□□□□ -0.6
Slc6a11P31650 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.3□□□□□ -0.6
Slc6a11P31650 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms