Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp3P28862 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp3P28862 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp3P28862 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Mmp3P28862 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.69□□□□□ -0.38
Mmp3P28862 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Mmp3P28862 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.69□□□□□ -0.38
Mmp3P28862 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp3P28862 Gm22138-201ENSMUST00000158748 128 ntBASIC12.69□□□□□ -0.38
Mmp3P28862 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.69□□□□□ -0.38
Mmp3P28862 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp3P28862 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.69□□□□□ -0.38
Mmp3P28862 Gm45219-201ENSMUST00000205602 465 ntBASIC12.69□□□□□ -0.38
Mmp3P28862 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.69□□□□□ -0.38
Mmp3P28862 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.69□□□□□ -0.38
Mmp3P28862 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Mmp3P28862 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.69□□□□□ -0.38
Mmp3P28862 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp3P28862 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.69□□□□□ -0.38
Mmp3P28862 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp3P28862 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp3P28862 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Mmp3P28862 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp3P28862 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp3P28862 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp3P28862 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp3P28862 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp3P28862 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp3P28862 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp3P28862 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Mmp3P28862 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp3P28862 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp3P28862 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Mmp3P28862 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp3P28862 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp3P28862 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Mmp3P28862 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.68□□□□□ -0.38
Mmp3P28862 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.68□□□□□ -0.38
Mmp3P28862 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Mmp3P28862 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.68□□□□□ -0.38
Mmp3P28862 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Mmp3P28862 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Mmp3P28862 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.68□□□□□ -0.38
Mmp3P28862 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.68□□□□□ -0.38
Mmp3P28862 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.68□□□□□ -0.38
Mmp3P28862 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.68□□□□□ -0.38
Mmp3P28862 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.68□□□□□ -0.38
Mmp3P28862 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.68□□□□□ -0.38
Mmp3P28862 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.68□□□□□ -0.38
Mmp3P28862 Gm3551-201ENSMUST00000190750 664 ntBASIC12.68□□□□□ -0.38
Mmp3P28862 Gm5982-201ENSMUST00000196234 512 ntBASIC12.68□□□□□ -0.38
Mmp3P28862 Gm43852-201ENSMUST00000202098 917 ntBASIC12.68□□□□□ -0.38
Mmp3P28862 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.68□□□□□ -0.38
Mmp3P28862 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.68□□□□□ -0.38
Mmp3P28862 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.68□□□□□ -0.38
Mmp3P28862 Gm10752-201ENSMUST00000218348 729 ntBASIC12.68□□□□□ -0.38
Mmp3P28862 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Mmp3P28862 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.68□□□□□ -0.38
Mmp3P28862 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.68□□□□□ -0.38
Mmp3P28862 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.68□□□□□ -0.38
Mmp3P28862 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms