Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nckap1P28660 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nckap1P28660 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nckap1P28660 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nckap1P28660 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nckap1P28660 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Nckap1P28660 Gm13916-201ENSMUST00000117368 628 ntBASIC11.86□□□□□ -0.51
Nckap1P28660 Gm15573-201ENSMUST00000119487 540 ntBASIC11.86□□□□□ -0.51
Nckap1P28660 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nckap1P28660 Gm4726-201ENSMUST00000135604 736 ntBASIC11.86□□□□□ -0.51
Nckap1P28660 Gm7666-201ENSMUST00000146631 819 ntBASIC11.86□□□□□ -0.51
Nckap1P28660 Gm6019-201ENSMUST00000148369 736 ntBASIC11.86□□□□□ -0.51
Nckap1P28660 Gm22144-201ENSMUST00000157402 102 ntBASIC11.86□□□□□ -0.51
Nckap1P28660 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.86□□□□□ -0.51
Nckap1P28660 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nckap1P28660 Gm27530-201ENSMUST00000184096 98 ntBASIC11.86□□□□□ -0.51
Nckap1P28660 Mir6546-201ENSMUST00000184460 62 ntBASIC11.86□□□□□ -0.51
Nckap1P28660 Gm29499-201ENSMUST00000189151 486 ntBASIC11.86□□□□□ -0.51
Nckap1P28660 Gm28329-201ENSMUST00000191208 689 ntBASIC11.86□□□□□ -0.51
Nckap1P28660 Gm29171-201ENSMUST00000191397 486 ntBASIC11.86□□□□□ -0.51
Nckap1P28660 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.86□□□□□ -0.51
Nckap1P28660 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.86□□□□□ -0.51
Nckap1P28660 Gm17831-201ENSMUST00000205579 900 ntBASIC11.86□□□□□ -0.51
Nckap1P28660 Gm45550-201ENSMUST00000209380 946 ntBASIC11.86□□□□□ -0.51
Nckap1P28660 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nckap1P28660 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Nckap1P28660 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.86□□□□□ -0.51
Nckap1P28660 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nckap1P28660 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nckap1P28660 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.86□□□□□ -0.51
Nckap1P28660 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nckap1P28660 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nckap1P28660 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nckap1P28660 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nckap1P28660 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
Nckap1P28660 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nckap1P28660 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Nckap1P28660 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nckap1P28660 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.86□□□□□ -0.51
Nckap1P28660 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nckap1P28660 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nckap1P28660 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
Nckap1P28660 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Nckap1P28660 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.85□□□□□ -0.51
Nckap1P28660 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Nckap1P28660 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Nckap1P28660 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.85□□□□□ -0.51
Nckap1P28660 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Nckap1P28660 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Nckap1P28660 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Nckap1P28660 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.85□□□□□ -0.51
Nckap1P28660 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.85□□□□□ -0.51
Nckap1P28660 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.85□□□□□ -0.51
Nckap1P28660 Gm44545-201ENSMUST00000208262 746 ntBASIC11.85□□□□□ -0.51
Nckap1P28660 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.85□□□□□ -0.51
Nckap1P28660 Gm45398-201ENSMUST00000210561 165 ntBASIC11.85□□□□□ -0.51
Nckap1P28660 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.85□□□□□ -0.51
Nckap1P28660 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.85□□□□□ -0.51
Nckap1P28660 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.85□□□□□ -0.51
Nckap1P28660 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.85□□□□□ -0.51
Nckap1P28660 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Nckap1P28660 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.85□□□□□ -0.51
Nckap1P28660 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.85□□□□□ -0.51
Nckap1P28660 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nckap1P28660 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms