Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nfkb1P25799 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nfkb1P25799 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.24□□□□□ -0.45
Nfkb1P25799 Gm37835-201ENSMUST00000193305 361 ntBASIC12.24□□□□□ -0.45
Nfkb1P25799 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.24□□□□□ -0.45
Nfkb1P25799 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.24□□□□□ -0.45
Nfkb1P25799 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nfkb1P25799 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nfkb1P25799 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.24□□□□□ -0.45
Nfkb1P25799 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.24□□□□□ -0.45
Nfkb1P25799 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.24□□□□□ -0.45
Nfkb1P25799 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.24□□□□□ -0.45
Nfkb1P25799 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nfkb1P25799 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nfkb1P25799 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nfkb1P25799 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nfkb1P25799 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Nfkb1P25799 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nfkb1P25799 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nfkb1P25799 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nfkb1P25799 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nfkb1P25799 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nfkb1P25799 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nfkb1P25799 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nfkb1P25799 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nfkb1P25799 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nfkb1P25799 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.24□□□□□ -0.45
Nfkb1P25799 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Nfkb1P25799 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nfkb1P25799 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nfkb1P25799 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nfkb1P25799 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nfkb1P25799 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.23□□□□□ -0.45
Nfkb1P25799 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nfkb1P25799 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nfkb1P25799 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nfkb1P25799 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nfkb1P25799 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nfkb1P25799 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nfkb1P25799 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.23□□□□□ -0.45
Nfkb1P25799 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nfkb1P25799 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nfkb1P25799 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.23□□□□□ -0.45
Nfkb1P25799 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nfkb1P25799 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nfkb1P25799 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nfkb1P25799 Gm15131-201ENSMUST00000119124 595 ntBASIC12.23□□□□□ -0.45
Nfkb1P25799 Gm15595-201ENSMUST00000120840 961 ntBASIC12.23□□□□□ -0.45
Nfkb1P25799 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.23□□□□□ -0.45
Nfkb1P25799 Gm4310-201ENSMUST00000177847 889 ntBASIC12.23□□□□□ -0.45
Nfkb1P25799 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.23□□□□□ -0.45
Nfkb1P25799 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Nfkb1P25799 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.23□□□□□ -0.45
Nfkb1P25799 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nfkb1P25799 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Nfkb1P25799 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.23□□□□□ -0.45
Nfkb1P25799 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Nfkb1P25799 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nfkb1P25799 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Nfkb1P25799 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.23□□□□□ -0.45
Nfkb1P25799 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nfkb1P25799 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nfkb1P25799 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nfkb1P25799 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nfkb1P25799 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nfkb1P25799 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nfkb1P25799 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nfkb1P25799 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nfkb1P25799 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nfkb1P25799 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nfkb1P25799 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nfkb1P25799 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nfkb1P25799 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nfkb1P25799 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.22□□□□□ -0.45
Nfkb1P25799 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Nfkb1P25799 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Nfkb1P25799 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.22□□□□□ -0.45
Nfkb1P25799 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Gm15573-201ENSMUST00000119487 540 ntBASIC12.22□□□□□ -0.45
Nfkb1P25799 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.22□□□□□ -0.45
Nfkb1P25799 Gm13263-201ENSMUST00000121271 838 ntBASIC12.22□□□□□ -0.45
Nfkb1P25799 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.22□□□□□ -0.45
Nfkb1P25799 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.22□□□□□ -0.45
Nfkb1P25799 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Gm8815-201ENSMUST00000173809 620 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms