Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.19□□□□□ -0.62
Clk1P22518 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.19□□□□□ -0.62
Clk1P22518 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Clk1P22518 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Clk1P22518 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 Gm24934-201ENSMUST00000103764 111 ntBASIC11.19□□□□□ -0.62
Clk1P22518 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 Mir1938-201ENSMUST00000158746 100 ntBASIC11.19□□□□□ -0.62
Clk1P22518 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.19□□□□□ -0.62
Clk1P22518 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.19□□□□□ -0.62
Clk1P22518 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.19□□□□□ -0.62
Clk1P22518 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.19□□□□□ -0.62
Clk1P22518 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.19□□□□□ -0.62
Clk1P22518 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.19□□□□□ -0.62
Clk1P22518 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Clk1P22518 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Clk1P22518 AC131029.1-201ENSMUST00000226391 2929 ntBASIC11.19□□□□□ -0.62
Clk1P22518 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC11.19□□□□□ -0.62
Clk1P22518 Bcl2l11-201ENSMUST00000019281 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Clk1P22518 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Clk1P22518 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Clk1P22518 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Clk1P22518 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.19□□□□□ -0.62
Clk1P22518 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.19□□□□□ -0.62
Clk1P22518 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clk1P22518 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Clk1P22518 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Clk1P22518 AC115746.1-201ENSMUST00000228949 3617 ntBASIC11.18□□□□□ -0.62
Clk1P22518 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Clk1P22518 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clk1P22518 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clk1P22518 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.18□□□□□ -0.62
Clk1P22518 P3h1-202ENSMUST00000081606 2820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clk1P22518 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Clk1P22518 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Clk1P22518 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clk1P22518 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.18□□□□□ -0.62
Clk1P22518 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clk1P22518 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clk1P22518 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.18□□□□□ -0.62
Clk1P22518 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Clk1P22518 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clk1P22518 Gm24830-201ENSMUST00000102024 166 ntBASIC11.18□□□□□ -0.62
Clk1P22518 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Clk1P22518 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Clk1P22518 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Clk1P22518 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Clk1P22518 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Clk1P22518 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Clk1P22518 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Clk1P22518 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Clk1P22518 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.18□□□□□ -0.62
Clk1P22518 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.18□□□□□ -0.62
Clk1P22518 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.18□□□□□ -0.62
Clk1P22518 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Clk1P22518 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Clk1P22518 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.18□□□□□ -0.62
Clk1P22518 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Clk1P22518 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.18□□□□□ -0.62
Clk1P22518 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.18□□□□□ -0.62
Clk1P22518 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.18□□□□□ -0.62
Clk1P22518 Gm26232-201ENSMUST00000083360 166 ntBASIC11.18□□□□□ -0.62
Clk1P22518 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.18□□□□□ -0.62
Clk1P22518 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clk1P22518 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clk1P22518 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Clk1P22518 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clk1P22518 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clk1P22518 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clk1P22518 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clk1P22518 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clk1P22518 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clk1P22518 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clk1P22518 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms