Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prim1P20664 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prim1P20664 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prim1P20664 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prim1P20664 CT009757.3-201ENSMUST00000223367 2320 ntBASIC15.31■□□□□ 0.04
Prim1P20664 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Prim1P20664 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Prim1P20664 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prim1P20664 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Prim1P20664 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Prim1P20664 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC15.3■□□□□ 0.04
Prim1P20664 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Prim1P20664 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Prim1P20664 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prim1P20664 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Prim1P20664 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Prim1P20664 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC15.3■□□□□ 0.04
Prim1P20664 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Prim1P20664 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prim1P20664 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC15.3■□□□□ 0.04
Prim1P20664 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC15.3■□□□□ 0.04
Prim1P20664 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Prim1P20664 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Prim1P20664 Gm43052-201ENSMUST00000201451 1628 ntBASIC15.3■□□□□ 0.04
Prim1P20664 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC15.3■□□□□ 0.04
Prim1P20664 Gm6905-201ENSMUST00000205729 511 ntBASIC15.3■□□□□ 0.04
Prim1P20664 Gm8285-201ENSMUST00000208293 759 ntBASIC15.3■□□□□ 0.04
Prim1P20664 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Prim1P20664 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC15.3■□□□□ 0.04
Prim1P20664 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Prim1P20664 AC091458.1-201ENSMUST00000220902 1361 ntBASIC15.3■□□□□ 0.04
Prim1P20664 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC15.3■□□□□ 0.04
Prim1P20664 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Prim1P20664 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Prim1P20664 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Prim1P20664 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Prim1P20664 Gm9387-201ENSMUST00000098624 1320 ntBASIC15.3■□□□□ 0.04
Prim1P20664 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Prim1P20664 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC15.3■□□□□ 0.04
Prim1P20664 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prim1P20664 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
Prim1P20664 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prim1P20664 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prim1P20664 Gm27177-202ENSMUST00000183514 2703 ntBASIC15.3■□□□□ 0.04
Prim1P20664 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prim1P20664 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC15.3■□□□□ 0.04
Prim1P20664 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Prim1P20664 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prim1P20664 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Prim1P20664 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Prim1P20664 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Prim1P20664 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prim1P20664 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prim1P20664 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Prim1P20664 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prim1P20664 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC15.29■□□□□ 0.04
Prim1P20664 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Prim1P20664 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prim1P20664 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prim1P20664 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Prim1P20664 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Prim1P20664 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC15.29■□□□□ 0.04
Prim1P20664 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC15.29■□□□□ 0.04
Prim1P20664 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Prim1P20664 Gm38117-201ENSMUST00000194653 939 ntBASIC15.29■□□□□ 0.04
Prim1P20664 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prim1P20664 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC15.29■□□□□ 0.04
Prim1P20664 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC15.29■□□□□ 0.04
Prim1P20664 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prim1P20664 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Prim1P20664 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Prim1P20664 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Prim1P20664 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prim1P20664 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Prim1P20664 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prim1P20664 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Prim1P20664 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Prim1P20664 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Prim1P20664 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC15.28■□□□□ 0.04
Prim1P20664 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prim1P20664 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prim1P20664 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prim1P20664 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prim1P20664 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Prim1P20664 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Prim1P20664 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC15.28■□□□□ 0.04
Prim1P20664 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prim1P20664 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prim1P20664 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prim1P20664 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prim1P20664 Gm8522-201ENSMUST00000118416 1929 ntBASIC15.28■□□□□ 0.04
Prim1P20664 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Prim1P20664 Gm8731-201ENSMUST00000118088 412 ntBASIC15.28■□□□□ 0.04
Prim1P20664 Gm11956-201ENSMUST00000119525 512 ntBASIC15.28■□□□□ 0.04
Prim1P20664 Mup-ps26-201ENSMUST00000121751 202 ntBASIC15.28■□□□□ 0.04
Prim1P20664 Gm22144-201ENSMUST00000157402 102 ntBASIC15.28■□□□□ 0.04
Prim1P20664 Gm19459-201ENSMUST00000176240 835 ntBASIC15.28■□□□□ 0.04
Prim1P20664 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC15.28■□□□□ 0.04
Prim1P20664 Gm37517-201ENSMUST00000194004 1289 ntBASIC15.28■□□□□ 0.04
Prim1P20664 Gm5714-201ENSMUST00000197343 566 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms