Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Tnfrsf9P20334 Gm37813-201ENSMUST00000195003 3695 ntBASIC10□□□□□ -0.81
Tnfrsf9P20334 Mmp9-201ENSMUST00000017881 3175 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Gm15459-201ENSMUST00000117405 1941 ntBASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Gm8355-201ENSMUST00000177767 1941 ntBASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Gm37863-201ENSMUST00000194911 1457 ntBASIC9.99□□□□□ -0.81
Tnfrsf9P20334 B230323A14Rik-201ENSMUST00000180488 2864 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Gm11628-201ENSMUST00000117568 171 ntBASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Gm23699-201ENSMUST00000158835 135 ntBASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Gm5277-201ENSMUST00000164923 556 ntBASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Gm8856-201ENSMUST00000185254 1144 ntBASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Gm3096-201ENSMUST00000185770 364 ntBASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Gm44251-201ENSMUST00000204963 442 ntBASIC9.99□□□□□ -0.81
Tnfrsf9P20334 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 D9Wsu149-201ENSMUST00000214169 594 ntBASIC9.99□□□□□ -0.81
Tnfrsf9P20334 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 CT025552.1-201ENSMUST00000224561 521 ntBASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Gm43081-201ENSMUST00000199082 1380 ntBASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tnfrsf9P20334 Rerg-201ENSMUST00000032347 2075 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tnfrsf9P20334 Gm5989-201ENSMUST00000096092 2077 ntBASIC9.98□□□□□ -0.81
Tnfrsf9P20334 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Tnfrsf9P20334 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tnfrsf9P20334 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tnfrsf9P20334 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tnfrsf9P20334 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tnfrsf9P20334 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC9.98□□□□□ -0.81
Tnfrsf9P20334 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tnfrsf9P20334 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tnfrsf9P20334 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tnfrsf9P20334 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tnfrsf9P20334 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Tnfrsf9P20334 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC9.98□□□□□ -0.81
Tnfrsf9P20334 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Tnfrsf9P20334 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Tnfrsf9P20334 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Tnfrsf9P20334 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Tnfrsf9P20334 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tnfrsf9P20334 Gm38227-201ENSMUST00000193036 1602 ntBASIC9.98□□□□□ -0.81
Tnfrsf9P20334 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Tnfrsf9P20334 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tnfrsf9P20334 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Tnfrsf9P20334 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC9.98□□□□□ -0.81
Tnfrsf9P20334 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC9.98□□□□□ -0.81
Tnfrsf9P20334 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tnfrsf9P20334 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms