Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmga1P17095 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.11□□□□□ -0.47
Hmga1P17095 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.1□□□□□ -0.47
Hmga1P17095 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmga1P17095 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmga1P17095 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmga1P17095 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmga1P17095 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
Hmga1P17095 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.1□□□□□ -0.47
Hmga1P17095 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hmga1P17095 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hmga1P17095 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hmga1P17095 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmga1P17095 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmga1P17095 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmga1P17095 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.1□□□□□ -0.47
Hmga1P17095 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
Hmga1P17095 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmga1P17095 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Hmga1P17095 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Hmga1P17095 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.1□□□□□ -0.47
Hmga1P17095 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.1□□□□□ -0.47
Hmga1P17095 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Hmga1P17095 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.1□□□□□ -0.47
Hmga1P17095 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmga1P17095 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.1□□□□□ -0.47
Hmga1P17095 Gm9645-201ENSMUST00000197131 792 ntBASIC12.1□□□□□ -0.47
Hmga1P17095 Gm10752-201ENSMUST00000218348 729 ntBASIC12.1□□□□□ -0.47
Hmga1P17095 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.1□□□□□ -0.47
Hmga1P17095 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Hmga1P17095 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.1□□□□□ -0.47
Hmga1P17095 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Hmga1P17095 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmga1P17095 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.1□□□□□ -0.47
Hmga1P17095 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hmga1P17095 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmga1P17095 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.1□□□□□ -0.47
Hmga1P17095 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.1□□□□□ -0.47
Hmga1P17095 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmga1P17095 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Hmga1P17095 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmga1P17095 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Hmga1P17095 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hmga1P17095 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmga1P17095 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmga1P17095 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.1□□□□□ -0.47
Hmga1P17095 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmga1P17095 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmga1P17095 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmga1P17095 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmga1P17095 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Hmga1P17095 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
Hmga1P17095 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Hmga1P17095 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Hmga1P17095 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmga1P17095 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Hmga1P17095 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Hmga1P17095 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hmga1P17095 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmga1P17095 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Hmga1P17095 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmga1P17095 Gm25076-201ENSMUST00000104098 132 ntBASIC12.09□□□□□ -0.47
Hmga1P17095 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hmga1P17095 Mir7076-201ENSMUST00000183519 74 ntBASIC12.09□□□□□ -0.47
Hmga1P17095 Gm43852-201ENSMUST00000202098 917 ntBASIC12.09□□□□□ -0.47
Hmga1P17095 Gm8574-201ENSMUST00000203207 924 ntBASIC12.09□□□□□ -0.47
Hmga1P17095 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Hmga1P17095 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Hmga1P17095 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmga1P17095 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.09□□□□□ -0.47
Hmga1P17095 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmga1P17095 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmga1P17095 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmga1P17095 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmga1P17095 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmga1P17095 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hmga1P17095 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmga1P17095 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmga1P17095 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmga1P17095 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.09□□□□□ -0.47
Hmga1P17095 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmga1P17095 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmga1P17095 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmga1P17095 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hmga1P17095 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmga1P17095 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmga1P17095 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmga1P17095 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Hmga1P17095 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Hmga1P17095 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.08□□□□□ -0.48
Hmga1P17095 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.08□□□□□ -0.48
Hmga1P17095 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms