Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.76□□□□□ -0.69
TpbpaP13438 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpaP13438 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
TpbpaP13438 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpaP13438 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpaP13438 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
TpbpaP13438 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpaP13438 Gm24934-201ENSMUST00000103764 111 ntBASIC10.76□□□□□ -0.69
TpbpaP13438 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.76□□□□□ -0.69
TpbpaP13438 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpaP13438 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.76□□□□□ -0.69
TpbpaP13438 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.76□□□□□ -0.69
TpbpaP13438 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpaP13438 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpaP13438 Gm3890-201ENSMUST00000182416 207 ntBASIC10.76□□□□□ -0.69
TpbpaP13438 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.76□□□□□ -0.69
TpbpaP13438 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.76□□□□□ -0.69
TpbpaP13438 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.76□□□□□ -0.69
TpbpaP13438 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.76□□□□□ -0.69
TpbpaP13438 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.76□□□□□ -0.69
TpbpaP13438 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpaP13438 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
TpbpaP13438 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC10.76□□□□□ -0.69
TpbpaP13438 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpaP13438 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpaP13438 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpaP13438 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpaP13438 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpaP13438 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpaP13438 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.76□□□□□ -0.69
TpbpaP13438 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpaP13438 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
TpbpaP13438 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpaP13438 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpaP13438 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpaP13438 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpaP13438 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.75□□□□□ -0.69
TpbpaP13438 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
TpbpaP13438 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
TpbpaP13438 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC10.75□□□□□ -0.69
TpbpaP13438 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 Gm12390-201ENSMUST00000117897 397 ntBASIC10.75□□□□□ -0.69
TpbpaP13438 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.75□□□□□ -0.69
TpbpaP13438 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.75□□□□□ -0.69
TpbpaP13438 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.75□□□□□ -0.69
TpbpaP13438 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.75□□□□□ -0.69
TpbpaP13438 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.75□□□□□ -0.69
TpbpaP13438 Gm6222-202ENSMUST00000182143 629 ntBASIC10.75□□□□□ -0.69
TpbpaP13438 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.75□□□□□ -0.69
TpbpaP13438 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
TpbpaP13438 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
TpbpaP13438 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
TpbpaP13438 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
TpbpaP13438 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
TpbpaP13438 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.75□□□□□ -0.69
TpbpaP13438 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
TpbpaP13438 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpaP13438 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
TpbpaP13438 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
TpbpaP13438 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TpbpaP13438 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.74□□□□□ -0.69
TpbpaP13438 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
TpbpaP13438 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TpbpaP13438 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TpbpaP13438 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
TpbpaP13438 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
TpbpaP13438 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.74□□□□□ -0.69
TpbpaP13438 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
TpbpaP13438 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TpbpaP13438 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
TpbpaP13438 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
TpbpaP13438 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms