Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Gm19287-201ENSMUST00000203190 358 ntBASIC11.47□□□□□ -0.57
Fv4P11370 Gm8956-201ENSMUST00000203939 825 ntBASIC11.47□□□□□ -0.57
Fv4P11370 Gm4607-201ENSMUST00000206649 577 ntBASIC11.47□□□□□ -0.57
Fv4P11370 Gm21769-201ENSMUST00000211922 111 ntBASIC11.47□□□□□ -0.57
Fv4P11370 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 Gm10478-201ENSMUST00000084451 396 ntBASIC11.47□□□□□ -0.57
Fv4P11370 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Fv4P11370 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Fv4P11370 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.46□□□□□ -0.57
Fv4P11370 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.46□□□□□ -0.57
Fv4P11370 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Fv4P11370 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Fv4P11370 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Fv4P11370 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Fv4P11370 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fv4P11370 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Fv4P11370 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fv4P11370 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.57
Fv4P11370 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.46□□□□□ -0.57
Fv4P11370 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fv4P11370 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fv4P11370 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.57
Fv4P11370 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.46□□□□□ -0.57
Fv4P11370 Gm13392-201ENSMUST00000117708 150 ntBASIC11.46□□□□□ -0.57
Fv4P11370 Gm14109-201ENSMUST00000118814 309 ntBASIC11.46□□□□□ -0.57
Fv4P11370 Gm11960-201ENSMUST00000122068 925 ntBASIC11.46□□□□□ -0.57
Fv4P11370 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Fv4P11370 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.46□□□□□ -0.57
Fv4P11370 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.46□□□□□ -0.57
Fv4P11370 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.46□□□□□ -0.57
Fv4P11370 Gm2991-201ENSMUST00000173338 480 ntBASIC11.46□□□□□ -0.57
Fv4P11370 Mir7085-201ENSMUST00000184353 66 ntBASIC11.46□□□□□ -0.57
Fv4P11370 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.46□□□□□ -0.57
Fv4P11370 Gm8885-201ENSMUST00000189382 598 ntBASIC11.46□□□□□ -0.57
Fv4P11370 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.46□□□□□ -0.57
Fv4P11370 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.46□□□□□ -0.57
Fv4P11370 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.46□□□□□ -0.57
Fv4P11370 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Fv4P11370 Gm9368-201ENSMUST00000219348 831 ntBASIC11.46□□□□□ -0.57
Fv4P11370 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Fv4P11370 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fv4P11370 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fv4P11370 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.46□□□□□ -0.57
Fv4P11370 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fv4P11370 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Fv4P11370 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
Fv4P11370 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fv4P11370 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fv4P11370 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fv4P11370 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fv4P11370 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fv4P11370 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Fv4P11370 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fv4P11370 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fv4P11370 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Fv4P11370 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fv4P11370 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fv4P11370 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Fv4P11370 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fv4P11370 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Fv4P11370 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.45□□□□□ -0.58
Fv4P11370 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fv4P11370 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fv4P11370 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fv4P11370 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Fv4P11370 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fv4P11370 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fv4P11370 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fv4P11370 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.45□□□□□ -0.58
Fv4P11370 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Fv4P11370 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fv4P11370 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Fv4P11370 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Fv4P11370 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.45□□□□□ -0.58
Fv4P11370 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.45□□□□□ -0.58
Fv4P11370 Gm27046-201ENSMUST00000182160 463 ntBASIC11.45□□□□□ -0.58
Fv4P11370 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.45□□□□□ -0.58
Fv4P11370 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.45□□□□□ -0.58
Fv4P11370 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.45□□□□□ -0.58
Fv4P11370 Gm45598-202ENSMUST00000210719 986 ntBASIC11.45□□□□□ -0.58
Fv4P11370 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.45□□□□□ -0.58
Fv4P11370 Gzmn-202ENSMUST00000225535 989 ntBASIC11.45□□□□□ -0.58
Fv4P11370 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fv4P11370 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fv4P11370 Gm5455-201ENSMUST00000058710 715 ntBASIC11.45□□□□□ -0.58
Fv4P11370 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fv4P11370 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Fv4P11370 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms