Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb3P09026 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb3P09026 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb3P09026 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb3P09026 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Hoxb3P09026 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.04□□□□□ -0.48
Hoxb3P09026 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.04□□□□□ -0.48
Hoxb3P09026 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb3P09026 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb3P09026 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Hoxb3P09026 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.04□□□□□ -0.48
Hoxb3P09026 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb3P09026 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb3P09026 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Hoxb3P09026 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb3P09026 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Hoxb3P09026 Gm20541-201ENSMUST00000173035 1406 ntBASIC12.03□□□□□ -0.48
Hoxb3P09026 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.03□□□□□ -0.48
Hoxb3P09026 AC158595.1-201ENSMUST00000217989 1435 ntBASIC12.03□□□□□ -0.48
Hoxb3P09026 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb3P09026 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb3P09026 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb3P09026 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb3P09026 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb3P09026 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Hoxb3P09026 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb3P09026 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Hoxb3P09026 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Hoxb3P09026 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb3P09026 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.03□□□□□ -0.48
Hoxb3P09026 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb3P09026 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb3P09026 Gm24791-201ENSMUST00000104284 131 ntBASIC12.03□□□□□ -0.48
Hoxb3P09026 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.03□□□□□ -0.48
Hoxb3P09026 Dcpp3-201ENSMUST00000115428 610 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Hoxb3P09026 Gm14585-201ENSMUST00000120713 634 ntBASIC12.03□□□□□ -0.48
Hoxb3P09026 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb3P09026 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.03□□□□□ -0.48
Hoxb3P09026 Rprl1-201ENSMUST00000158050 327 ntBASIC12.03□□□□□ -0.48
Hoxb3P09026 Gm22764-201ENSMUST00000158370 92 ntBASIC12.03□□□□□ -0.48
Hoxb3P09026 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Hoxb3P09026 Gm37024-201ENSMUST00000192224 868 ntBASIC12.03□□□□□ -0.48
Hoxb3P09026 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC12.03□□□□□ -0.48
Hoxb3P09026 Gm19009-201ENSMUST00000223072 823 ntBASIC12.03□□□□□ -0.48
Hoxb3P09026 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb3P09026 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb3P09026 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb3P09026 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb3P09026 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.03□□□□□ -0.48
Hoxb3P09026 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb3P09026 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb3P09026 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.03□□□□□ -0.48
Hoxb3P09026 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.03□□□□□ -0.48
Hoxb3P09026 Timm21-201ENSMUST00000025547 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb3P09026 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
Hoxb3P09026 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb3P09026 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb3P09026 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb3P09026 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb3P09026 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb3P09026 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb3P09026 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb3P09026 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Hoxb3P09026 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxb3P09026 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Hoxb3P09026 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.02□□□□□ -0.48
Hoxb3P09026 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxb3P09026 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxb3P09026 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxb3P09026 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Hoxb3P09026 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Hoxb3P09026 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hoxb3P09026 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxb3P09026 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hoxb3P09026 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.02□□□□□ -0.49
Hoxb3P09026 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxb3P09026 Gm22133-201ENSMUST00000102082 109 ntBASIC12.02□□□□□ -0.49
Hoxb3P09026 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxb3P09026 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxb3P09026 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxb3P09026 Gm15003-201ENSMUST00000118884 446 ntBASIC12.02□□□□□ -0.49
Hoxb3P09026 Gm12501-201ENSMUST00000119163 529 ntBASIC12.02□□□□□ -0.49
Hoxb3P09026 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.02□□□□□ -0.49
Hoxb3P09026 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.02□□□□□ -0.49
Hoxb3P09026 Gm16305-201ENSMUST00000140747 556 ntBASIC12.02□□□□□ -0.49
Hoxb3P09026 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.02□□□□□ -0.49
Hoxb3P09026 Gm20414-201ENSMUST00000172918 646 ntBASIC12.02□□□□□ -0.49
Hoxb3P09026 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hoxb3P09026 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hoxb3P09026 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC12.02□□□□□ -0.49
Hoxb3P09026 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxb3P09026 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC12.02□□□□□ -0.49
Hoxb3P09026 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC12.02□□□□□ -0.49
Hoxb3P09026 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxb3P09026 Gm37809-201ENSMUST00000195050 931 ntBASIC12.02□□□□□ -0.49
Hoxb3P09026 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC12.02□□□□□ -0.49
Hoxb3P09026 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC12.02□□□□□ -0.49
Hoxb3P09026 Gm42464-201ENSMUST00000196717 417 ntBASIC12.02□□□□□ -0.49
Hoxb3P09026 Gm43550-201ENSMUST00000200597 303 ntBASIC12.02□□□□□ -0.49
Hoxb3P09026 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms