Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.58□□□□□ -0.4
Hoxc8P09025 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc8P09025 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc8P09025 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hoxc8P09025 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.58□□□□□ -0.4
Hoxc8P09025 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc8P09025 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc8P09025 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Hoxc8P09025 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc8P09025 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Hoxc8P09025 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc8P09025 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.57□□□□□ -0.4
Hoxc8P09025 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc8P09025 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc8P09025 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc8P09025 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc8P09025 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.57□□□□□ -0.4
Hoxc8P09025 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc8P09025 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc8P09025 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc8P09025 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc8P09025 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc8P09025 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc8P09025 Gm14071-201ENSMUST00000117817 509 ntBASIC12.57□□□□□ -0.4
Hoxc8P09025 Gm13422-201ENSMUST00000118834 504 ntBASIC12.57□□□□□ -0.4
Hoxc8P09025 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc8P09025 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.57□□□□□ -0.4
Hoxc8P09025 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxc8P09025 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.57□□□□□ -0.4
Hoxc8P09025 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxc8P09025 Gm9135-201ENSMUST00000182963 990 ntBASIC12.57□□□□□ -0.4
Hoxc8P09025 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc8P09025 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc8P09025 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc8P09025 Gm18059-201ENSMUST00000208073 580 ntBASIC12.57□□□□□ -0.4
Hoxc8P09025 Gm18514-201ENSMUST00000218980 436 ntBASIC12.57□□□□□ -0.4
Hoxc8P09025 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.57□□□□□ -0.4
Hoxc8P09025 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc8P09025 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc8P09025 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc8P09025 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.57□□□□□ -0.4
Hoxc8P09025 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc8P09025 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc8P09025 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc8P09025 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc8P09025 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc8P09025 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc8P09025 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Hoxc8P09025 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc8P09025 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc8P09025 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc8P09025 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc8P09025 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc8P09025 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc8P09025 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.56□□□□□ -0.4
Hoxc8P09025 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.56□□□□□ -0.4
Hoxc8P09025 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc8P09025 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.56□□□□□ -0.4
Hoxc8P09025 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.56□□□□□ -0.4
Hoxc8P09025 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc8P09025 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc8P09025 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Hoxc8P09025 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Hoxc8P09025 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc8P09025 Gm25951-201ENSMUST00000175330 64 ntBASIC12.56□□□□□ -0.4
Hoxc8P09025 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc8P09025 Gm19587-201ENSMUST00000191395 545 ntBASIC12.56□□□□□ -0.4
Hoxc8P09025 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC12.56□□□□□ -0.4
Hoxc8P09025 Gm18968-201ENSMUST00000221319 862 ntBASIC12.56□□□□□ -0.4
Hoxc8P09025 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc8P09025 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Hoxc8P09025 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc8P09025 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Hoxc8P09025 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Hoxc8P09025 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc8P09025 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Hoxc8P09025 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Hoxc8P09025 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc8P09025 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc8P09025 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc8P09025 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.56□□□□□ -0.4
Hoxc8P09025 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.56□□□□□ -0.4
Hoxc8P09025 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Hoxc8P09025 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.56□□□□□ -0.4
Hoxc8P09025 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Hoxc8P09025 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.55□□□□□ -0.4
Hoxc8P09025 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Hoxc8P09025 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Hoxc8P09025 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms