Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10□□□□□ -0.81
Hoxa3P02831 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC10□□□□□ -0.81
Hoxa3P02831 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10□□□□□ -0.81
Hoxa3P02831 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC10□□□□□ -0.81
Hoxa3P02831 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10□□□□□ -0.81
Hoxa3P02831 Gm37986-201ENSMUST00000193285 383 ntBASIC10□□□□□ -0.81
Hoxa3P02831 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10□□□□□ -0.81
Hoxa3P02831 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC10□□□□□ -0.81
Hoxa3P02831 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10□□□□□ -0.81
Hoxa3P02831 Gm5369-201ENSMUST00000217499 588 ntBASIC10□□□□□ -0.81
Hoxa3P02831 Olfr1347-205ENSMUST00000220413 964 ntBASIC10□□□□□ -0.81
Hoxa3P02831 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10□□□□□ -0.81
Hoxa3P02831 AC131330.1-201ENSMUST00000227814 1015 ntBASIC10□□□□□ -0.81
Hoxa3P02831 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10□□□□□ -0.81
Hoxa3P02831 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10□□□□□ -0.81
Hoxa3P02831 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Hoxa3P02831 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Hoxa3P02831 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Hoxa3P02831 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Hoxa3P02831 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Hoxa3P02831 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Hoxa3P02831 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Hoxa3P02831 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Hoxa3P02831 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
Hoxa3P02831 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10□□□□□ -0.81
Hoxa3P02831 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC9.99□□□□□ -0.81
Hoxa3P02831 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC9.99□□□□□ -0.81
Hoxa3P02831 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Hoxa3P02831 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC9.99□□□□□ -0.81
Hoxa3P02831 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Hoxa3P02831 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Gm9361-201ENSMUST00000198695 1507 ntBASIC9.99□□□□□ -0.81
Hoxa3P02831 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC9.99□□□□□ -0.81
Hoxa3P02831 Gm11450-201ENSMUST00000121144 333 ntBASIC9.99□□□□□ -0.81
Hoxa3P02831 Gm12164-201ENSMUST00000121695 551 ntBASIC9.99□□□□□ -0.81
Hoxa3P02831 Gm22902-201ENSMUST00000158488 302 ntBASIC9.99□□□□□ -0.81
Hoxa3P02831 Gm43947-201ENSMUST00000203019 959 ntBASIC9.99□□□□□ -0.81
Hoxa3P02831 Gm44100-201ENSMUST00000204329 436 ntBASIC9.99□□□□□ -0.81
Hoxa3P02831 Gm17827-201ENSMUST00000211825 742 ntBASIC9.99□□□□□ -0.81
Hoxa3P02831 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Hoxa3P02831 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Hoxa3P02831 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Hoxa3P02831 Gm13812-201ENSMUST00000118061 1347 ntBASIC9.99□□□□□ -0.81
Hoxa3P02831 Gm13810-201ENSMUST00000118584 1347 ntBASIC9.99□□□□□ -0.81
Hoxa3P02831 Gm4735-201ENSMUST00000138679 1302 ntBASIC9.99□□□□□ -0.81
Hoxa3P02831 Gm5855-201ENSMUST00000200240 1305 ntBASIC9.99□□□□□ -0.81
Hoxa3P02831 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Hoxa3P02831 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Gm8038-201ENSMUST00000164674 2044 ntBASIC9.99□□□□□ -0.81
Hoxa3P02831 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxa3P02831 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Hoxa3P02831 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxa3P02831 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxa3P02831 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC9.98□□□□□ -0.81
Hoxa3P02831 Gm43365-201ENSMUST00000196522 2106 ntBASIC9.98□□□□□ -0.81
Hoxa3P02831 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxa3P02831 Gm45053-201ENSMUST00000206112 2499 ntBASIC9.98□□□□□ -0.81
Hoxa3P02831 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxa3P02831 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC9.98□□□□□ -0.81
Hoxa3P02831 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxa3P02831 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxa3P02831 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Hoxa3P02831 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Hoxa3P02831 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxa3P02831 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxa3P02831 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxa3P02831 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxa3P02831 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxa3P02831 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxa3P02831 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms