Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
P01852 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P01852 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
P01852 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P01852 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P01852 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
P01852 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
P01852 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P01852 Gm14208-201ENSMUST00000119645 678 ntBASIC10.9□□□□□ -0.66
P01852 Gm12164-201ENSMUST00000121695 551 ntBASIC10.9□□□□□ -0.66
P01852 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.9□□□□□ -0.66
P01852 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.9□□□□□ -0.66
P01852 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
P01852 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
P01852 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P01852 Gm17827-201ENSMUST00000211825 742 ntBASIC10.9□□□□□ -0.66
P01852 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P01852 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
P01852 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
P01852 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
P01852 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P01852 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
P01852 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
P01852 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.9□□□□□ -0.66
P01852 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P01852 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
P01852 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
P01852 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
P01852 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
P01852 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
P01852 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
P01852 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
P01852 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
P01852 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
P01852 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
P01852 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.9□□□□□ -0.67
P01852 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
P01852 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.89□□□□□ -0.67
P01852 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.89□□□□□ -0.67
P01852 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
P01852 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.89□□□□□ -0.67
P01852 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
P01852 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
P01852 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.89□□□□□ -0.67
P01852 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
P01852 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.89□□□□□ -0.67
P01852 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
P01852 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
P01852 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Gm27341-201ENSMUST00000183570 106 ntBASIC10.89□□□□□ -0.67
P01852 Gm28071-201ENSMUST00000190355 478 ntBASIC10.89□□□□□ -0.67
P01852 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.89□□□□□ -0.67
P01852 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.89□□□□□ -0.67
P01852 Gm8956-201ENSMUST00000203939 825 ntBASIC10.89□□□□□ -0.67
P01852 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.89□□□□□ -0.67
P01852 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.89□□□□□ -0.67
P01852 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
P01852 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.89□□□□□ -0.67
P01852 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01852 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P01852 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01852 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01852 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P01852 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01852 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.88□□□□□ -0.67
P01852 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms