Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
TcraP01849 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
TcraP01849 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC8.67□□□□□ -1.02
TcraP01849 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
TcraP01849 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
TcraP01849 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC8.66□□□□□ -1.02
TcraP01849 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC8.66□□□□□ -1.02
TcraP01849 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
TcraP01849 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC8.66□□□□□ -1.02
TcraP01849 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
TcraP01849 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC8.66□□□□□ -1.02
TcraP01849 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
TcraP01849 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC8.66□□□□□ -1.02
TcraP01849 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC8.66□□□□□ -1.02
TcraP01849 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Gm15703-201ENSMUST00000120250 880 ntBASIC8.66□□□□□ -1.02
TcraP01849 Gm11918-201ENSMUST00000121660 179 ntBASIC8.66□□□□□ -1.02
TcraP01849 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC8.66□□□□□ -1.02
TcraP01849 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Gm28911-201ENSMUST00000188837 117 ntBASIC8.66□□□□□ -1.02
TcraP01849 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Gtpbp10-211ENSMUST00000198799 648 ntBASIC8.66□□□□□ -1.02
TcraP01849 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC8.66□□□□□ -1.02
TcraP01849 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC8.66□□□□□ -1.02
TcraP01849 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC8.66□□□□□ -1.02
TcraP01849 AC165260.3-202ENSMUST00000224550 1031 ntBASIC8.66□□□□□ -1.02
TcraP01849 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
TcraP01849 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC8.66□□□□□ -1.02
TcraP01849 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
TcraP01849 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
TcraP01849 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Gm38194-201ENSMUST00000194529 2211 ntBASIC8.66□□□□□ -1.02
TcraP01849 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Gm43760-201ENSMUST00000202120 3015 ntBASIC8.66□□□□□ -1.02
TcraP01849 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
TcraP01849 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TcraP01849 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
TcraP01849 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
TcraP01849 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC8.65□□□□□ -1.02
TcraP01849 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
TcraP01849 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms