Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.41□□□□□ -0.58
Hcn1O88704 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.41□□□□□ -0.58
Hcn1O88704 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Hcn1O88704 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hcn1O88704 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Hcn1O88704 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hcn1O88704 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hcn1O88704 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hcn1O88704 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hcn1O88704 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hcn1O88704 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.41□□□□□ -0.58
Hcn1O88704 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.41□□□□□ -0.58
Hcn1O88704 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hcn1O88704 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.41□□□□□ -0.58
Hcn1O88704 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.41□□□□□ -0.58
Hcn1O88704 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.41□□□□□ -0.58
Hcn1O88704 AA914427-201ENSMUST00000193194 1166 ntBASIC11.41□□□□□ -0.58
Hcn1O88704 Gm44958-201ENSMUST00000203734 736 ntBASIC11.41□□□□□ -0.58
Hcn1O88704 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hcn1O88704 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hcn1O88704 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.41□□□□□ -0.58
Hcn1O88704 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.41□□□□□ -0.58
Hcn1O88704 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hcn1O88704 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Hcn1O88704 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hcn1O88704 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hcn1O88704 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Hcn1O88704 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hcn1O88704 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hcn1O88704 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hcn1O88704 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.41□□□□□ -0.58
Hcn1O88704 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Hcn1O88704 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Hcn1O88704 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hcn1O88704 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hcn1O88704 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hcn1O88704 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hcn1O88704 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Hcn1O88704 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hcn1O88704 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hcn1O88704 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hcn1O88704 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hcn1O88704 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.41□□□□□ -0.58
Hcn1O88704 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hcn1O88704 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hcn1O88704 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Hcn1O88704 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Hcn1O88704 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hcn1O88704 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hcn1O88704 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hcn1O88704 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hcn1O88704 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Hcn1O88704 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hcn1O88704 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Hcn1O88704 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hcn1O88704 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hcn1O88704 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hcn1O88704 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hcn1O88704 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hcn1O88704 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.4□□□□□ -0.58
Hcn1O88704 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hcn1O88704 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hcn1O88704 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hcn1O88704 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hcn1O88704 Gm15808-201ENSMUST00000119046 604 ntBASIC11.4□□□□□ -0.58
Hcn1O88704 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hcn1O88704 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hcn1O88704 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hcn1O88704 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Hcn1O88704 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hcn1O88704 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hcn1O88704 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hcn1O88704 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hcn1O88704 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hcn1O88704 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hcn1O88704 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hcn1O88704 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hcn1O88704 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hcn1O88704 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hcn1O88704 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hcn1O88704 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Hcn1O88704 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hcn1O88704 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hcn1O88704 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Hcn1O88704 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hcn1O88704 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hcn1O88704 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.39□□□□□ -0.59
Hcn1O88704 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.39□□□□□ -0.59
Hcn1O88704 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.39□□□□□ -0.59
Hcn1O88704 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms