Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc3O88196 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc3O88196 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc3O88196 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.38□□□□□ -0.43
Ttc3O88196 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc3O88196 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.38□□□□□ -0.43
Ttc3O88196 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc3O88196 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc3O88196 Gm14395-201ENSMUST00000120494 563 ntBASIC12.38□□□□□ -0.43
Ttc3O88196 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc3O88196 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.38□□□□□ -0.43
Ttc3O88196 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.38□□□□□ -0.43
Ttc3O88196 Gm3793-201ENSMUST00000204973 672 ntBASIC12.38□□□□□ -0.43
Ttc3O88196 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc3O88196 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.38□□□□□ -0.43
Ttc3O88196 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc3O88196 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc3O88196 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ttc3O88196 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Ttc3O88196 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Ttc3O88196 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc3O88196 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc3O88196 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc3O88196 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc3O88196 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc3O88196 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc3O88196 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ttc3O88196 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc3O88196 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc3O88196 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc3O88196 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc3O88196 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc3O88196 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc3O88196 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.37□□□□□ -0.43
Ttc3O88196 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc3O88196 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc3O88196 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc3O88196 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ttc3O88196 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.37□□□□□ -0.43
Ttc3O88196 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.37□□□□□ -0.43
Ttc3O88196 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc3O88196 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc3O88196 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc3O88196 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc3O88196 Gm23153-201ENSMUST00000175323 313 ntBASIC12.37□□□□□ -0.43
Ttc3O88196 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ttc3O88196 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.37□□□□□ -0.43
Ttc3O88196 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.37□□□□□ -0.43
Ttc3O88196 Gm17877-201ENSMUST00000192578 814 ntBASIC12.37□□□□□ -0.43
Ttc3O88196 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc3O88196 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.37□□□□□ -0.43
Ttc3O88196 Gm9139-201ENSMUST00000218817 700 ntBASIC12.37□□□□□ -0.43
Ttc3O88196 Gm23105-201ENSMUST00000083719 134 ntBASIC12.37□□□□□ -0.43
Ttc3O88196 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc3O88196 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.37□□□□□ -0.43
Ttc3O88196 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.37□□□□□ -0.43
Ttc3O88196 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc3O88196 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc3O88196 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ttc3O88196 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc3O88196 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc3O88196 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc3O88196 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc3O88196 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ttc3O88196 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc3O88196 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ttc3O88196 Gm11675-201ENSMUST00000121873 832 ntBASIC12.36□□□□□ -0.43
Ttc3O88196 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.36□□□□□ -0.43
Ttc3O88196 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ttc3O88196 Gm37028-201ENSMUST00000194276 107 ntBASIC12.36□□□□□ -0.43
Ttc3O88196 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc3O88196 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.36□□□□□ -0.43
Ttc3O88196 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc3O88196 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ttc3O88196 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc3O88196 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ttc3O88196 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc3O88196 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc3O88196 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc3O88196 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ttc3O88196 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.36□□□□□ -0.43
Ttc3O88196 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc3O88196 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.36□□□□□ -0.43
Ttc3O88196 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc3O88196 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc3O88196 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc3O88196 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Ttc3O88196 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc3O88196 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ttc3O88196 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc3O88196 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc3O88196 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc3O88196 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc3O88196 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc3O88196 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc3O88196 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.36□□□□□ -0.43
Ttc3O88196 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc3O88196 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc3O88196 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Ttc3O88196 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms