Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC9.8□□□□□ -0.84
Hmgb3O54879 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC9.8□□□□□ -0.84
Hmgb3O54879 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
Hmgb3O54879 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC9.8□□□□□ -0.84
Hmgb3O54879 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC9.8□□□□□ -0.84
Hmgb3O54879 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hmgb3O54879 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Hmgb3O54879 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hmgb3O54879 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Hmgb3O54879 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC9.8□□□□□ -0.84
Hmgb3O54879 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC9.8□□□□□ -0.84
Hmgb3O54879 AC238811.3-201ENSMUST00000225422 709 ntBASIC9.8□□□□□ -0.84
Hmgb3O54879 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC9.8□□□□□ -0.84
Hmgb3O54879 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Hmgb3O54879 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hmgb3O54879 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hmgb3O54879 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.8□□□□□ -0.84
Hmgb3O54879 Zfp532-208ENSMUST00000182852 5476 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Hmgb3O54879 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hmgb3O54879 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hmgb3O54879 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Hmgb3O54879 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Hmgb3O54879 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hmgb3O54879 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hmgb3O54879 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Hmgb3O54879 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Hmgb3O54879 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hmgb3O54879 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hmgb3O54879 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hmgb3O54879 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hmgb3O54879 AC108858.2-201ENSMUST00000228186 1425 ntBASIC9.8□□□□□ -0.84
Hmgb3O54879 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hmgb3O54879 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hmgb3O54879 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hmgb3O54879 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hmgb3O54879 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC9.8□□□□□ -0.84
Hmgb3O54879 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hmgb3O54879 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC9.8□□□□□ -0.84
Hmgb3O54879 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC9.8□□□□□ -0.84
Hmgb3O54879 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Hmgb3O54879 Plec-202ENSMUST00000054449 15018 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Hmgb3O54879 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC9.79□□□□□ -0.84
Hmgb3O54879 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Gm5884-201ENSMUST00000036712 1479 ntBASIC9.79□□□□□ -0.84
Hmgb3O54879 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.79□□□□□ -0.84
Hmgb3O54879 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Hmgb3O54879 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC9.79□□□□□ -0.84
Hmgb3O54879 Setd7-201ENSMUST00000037141 7411 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Tln2-201ENSMUST00000039662 8052 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 D430042O09Rik-201ENSMUST00000069660 6148 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC9.79□□□□□ -0.84
Hmgb3O54879 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Myh10-201ENSMUST00000018887 7667 ntTSL 5 BASIC9.79□□□□□ -0.84
Hmgb3O54879 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Hmgb3O54879 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC9.79□□□□□ -0.84
Hmgb3O54879 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC9.79□□□□□ -0.84
Hmgb3O54879 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC9.79□□□□□ -0.84
Hmgb3O54879 Gm37922-201ENSMUST00000195596 455 ntBASIC9.79□□□□□ -0.84
Hmgb3O54879 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC9.79□□□□□ -0.84
Hmgb3O54879 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC9.79□□□□□ -0.84
Hmgb3O54879 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 AC155286.1-201ENSMUST00000218632 448 ntBASIC9.79□□□□□ -0.84
Hmgb3O54879 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC9.79□□□□□ -0.84
Hmgb3O54879 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Cntnap2-205ENSMUST00000199100 6279 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC9.79□□□□□ -0.84
Hmgb3O54879 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Hmgb3O54879 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC9.79□□□□□ -0.84
Hmgb3O54879 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Dennd1b-202ENSMUST00000168527 8206 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Hmgb3O54879 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC9.79□□□□□ -0.84
Hmgb3O54879 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgb3O54879 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgb3O54879 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
Hmgb3O54879 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgb3O54879 Gm43937-201ENSMUST00000204640 3122 ntBASIC9.78□□□□□ -0.84
Hmgb3O54879 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgb3O54879 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgb3O54879 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 343.2 ms