Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Gm7504-201ENSMUST00000201449 424 ntBASIC14.23□□□□□ -0.13
Ube4aE9Q735 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4aE9Q735 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4aE9Q735 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Cog3-203ENSMUST00000227473 4197 ntBASIC14.22□□□□□ -0.13
Ube4aE9Q735 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Gm8531-201ENSMUST00000188319 893 ntBASIC14.22□□□□□ -0.13
Ube4aE9Q735 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC14.22□□□□□ -0.13
Ube4aE9Q735 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC14.22□□□□□ -0.13
Ube4aE9Q735 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Gm19009-201ENSMUST00000223072 823 ntBASIC14.22□□□□□ -0.13
Ube4aE9Q735 CT573047.1-201ENSMUST00000223652 851 ntBASIC14.22□□□□□ -0.13
Ube4aE9Q735 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Gm21358-201ENSMUST00000191645 1659 ntBASIC14.22□□□□□ -0.13
Ube4aE9Q735 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.22□□□□□ -0.13
Ube4aE9Q735 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ube4aE9Q735 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4aE9Q735 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ube4aE9Q735 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4aE9Q735 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ube4aE9Q735 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.21□□□□□ -0.13
Ube4aE9Q735 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ube4aE9Q735 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ube4aE9Q735 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4aE9Q735 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4aE9Q735 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4aE9Q735 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4aE9Q735 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4aE9Q735 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4aE9Q735 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4aE9Q735 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4aE9Q735 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ube4aE9Q735 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4aE9Q735 AC138329.2-201ENSMUST00000225579 1842 ntBASIC14.21□□□□□ -0.13
Ube4aE9Q735 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ube4aE9Q735 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ube4aE9Q735 Gm11960-201ENSMUST00000122068 925 ntBASIC14.21□□□□□ -0.13
Ube4aE9Q735 Gm16397-201ENSMUST00000122201 494 ntBASIC14.21□□□□□ -0.13
Ube4aE9Q735 Gm24398-201ENSMUST00000157870 109 ntBASIC14.21□□□□□ -0.13
Ube4aE9Q735 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4aE9Q735 Gm6548-201ENSMUST00000167498 1165 ntBASIC14.21□□□□□ -0.13
Ube4aE9Q735 Gm7741-201ENSMUST00000181445 989 ntBASIC14.21□□□□□ -0.13
Ube4aE9Q735 Mir6958-201ENSMUST00000184207 73 ntBASIC14.21□□□□□ -0.13
Ube4aE9Q735 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC14.21□□□□□ -0.13
Ube4aE9Q735 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4aE9Q735 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4aE9Q735 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC14.21□□□□□ -0.13
Ube4aE9Q735 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC14.21□□□□□ -0.13
Ube4aE9Q735 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC14.21□□□□□ -0.13
Ube4aE9Q735 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4aE9Q735 Gm23680-201ENSMUST00000083162 164 ntBASIC14.21□□□□□ -0.13
Ube4aE9Q735 Gm23105-201ENSMUST00000083719 134 ntBASIC14.21□□□□□ -0.13
Ube4aE9Q735 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4aE9Q735 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4aE9Q735 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4aE9Q735 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4aE9Q735 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms