Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Crisp4-203ENSMUST00000115344 960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Gm15702-201ENSMUST00000119680 444 ntBASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Gm12679-201ENSMUST00000123899 636 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 4933439N14Rik-201ENSMUST00000211062 1087 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Gm9102-201ENSMUST00000219250 465 ntBASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Gm29101-201ENSMUST00000188329 1471 ntBASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Gm24066-201ENSMUST00000104515 131 ntBASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Gm3828-201ENSMUST00000121817 257 ntBASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Gm24597-201ENSMUST00000122503 300 ntBASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Ing5-203ENSMUST00000190476 918 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 AC127583.1-201ENSMUST00000224351 540 ntBASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Gm25483-201ENSMUST00000083224 227 ntBASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a3E9PWQ3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Wars2-205ENSMUST00000198044 403 ntTSL 3 BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Gm5996-201ENSMUST00000211110 718 ntBASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Gm45893-201ENSMUST00000211899 247 ntBASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 AC159899.1-201ENSMUST00000214024 733 ntBASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Gm8111-201ENSMUST00000117659 987 ntBASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Baat-202ENSMUST00000166036 1263 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Gm9117-201ENSMUST00000177735 1098 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Gm26943-201ENSMUST00000182295 957 ntBASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Gm7516-201ENSMUST00000186198 706 ntBASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Gm42617-201ENSMUST00000197640 1229 ntBASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Gm6352-201ENSMUST00000203583 1134 ntBASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Gm8960-201ENSMUST00000219787 788 ntBASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 BC048562-201ENSMUST00000057265 690 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a3E9PWQ3 Gm14853-201ENSMUST00000116081 549 ntBASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Gm17197-201ENSMUST00000163160 452 ntTSL 2 BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 2810429I04Rik-204ENSMUST00000185835 923 ntTSL 3 BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 AC122459.4-201ENSMUST00000228654 551 ntBASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Kcnk2-209ENSMUST00000194402 1373 ntTSL 5 BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Dtymk-203ENSMUST00000112893 1040 ntTSL 2 BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Gm25145-201ENSMUST00000177640 110 ntBASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms