Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Gm14460-201ENSMUST00000121511 639 ntBASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Gm8194-201ENSMUST00000159783 859 ntBASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Gm3332-201ENSMUST00000189337 928 ntBASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Gm45550-201ENSMUST00000209380 946 ntBASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cfap99A0A140LIX9 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Map1b-203ENSMUST00000223725 2669 ntBASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Gm9129-201ENSMUST00000218173 1689 ntBASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 CT009713.8-202ENSMUST00000224732 385 ntBASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.21□□□□□ -0.13
Cfap99A0A140LIX9 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms