Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Gm22711-201ENSMUST00000116890 133 ntBASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Gm11956-201ENSMUST00000119525 512 ntBASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Gm12407-201ENSMUST00000180219 324 ntBASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Gm43852-201ENSMUST00000202098 917 ntBASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcb1Q9Z0H3 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Gm15573-201ENSMUST00000119487 540 ntBASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Gm24844-201ENSMUST00000158679 127 ntBASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Gm3150-201ENSMUST00000166418 204 ntBASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Gm21092-201ENSMUST00000178995 955 ntBASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Gm38151-201ENSMUST00000195085 289 ntBASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms