Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Gm8100-201ENSMUST00000182906 988 ntBASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Gm14724-201ENSMUST00000118400 537 ntBASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Gm14441-201ENSMUST00000121960 540 ntBASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Gm2965-201ENSMUST00000198365 343 ntBASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Gm5051-201ENSMUST00000204085 485 ntBASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
Lhx9Q9WUH2 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Gm11509-201ENSMUST00000117358 325 ntBASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Gm19459-201ENSMUST00000176240 835 ntBASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Gm10288-201ENSMUST00000084614 537 ntBASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms