Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
RpgrQ9R0X5 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RpgrQ9R0X5 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RpgrQ9R0X5 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.14□□□□□ -0.47
RpgrQ9R0X5 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.14□□□□□ -0.47
RpgrQ9R0X5 Gm9022-201ENSMUST00000182482 992 ntBASIC12.14□□□□□ -0.47
RpgrQ9R0X5 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RpgrQ9R0X5 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.14□□□□□ -0.47
RpgrQ9R0X5 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RpgrQ9R0X5 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
RpgrQ9R0X5 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RpgrQ9R0X5 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RpgrQ9R0X5 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RpgrQ9R0X5 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RpgrQ9R0X5 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RpgrQ9R0X5 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12.14□□□□□ -0.47
RpgrQ9R0X5 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RpgrQ9R0X5 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RpgrQ9R0X5 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RpgrQ9R0X5 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
RpgrQ9R0X5 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
RpgrQ9R0X5 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RpgrQ9R0X5 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RpgrQ9R0X5 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RpgrQ9R0X5 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.14□□□□□ -0.47
RpgrQ9R0X5 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
RpgrQ9R0X5 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Gm14726-201ENSMUST00000120623 896 ntBASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Gm31256-201ENSMUST00000194705 506 ntBASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Gm45331-201ENSMUST00000209868 554 ntBASIC12.13□□□□□ -0.47
RpgrQ9R0X5 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.13□□□□□ -0.47
RpgrQ9R0X5 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
RpgrQ9R0X5 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.12□□□□□ -0.47
RpgrQ9R0X5 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Gm28882-201ENSMUST00000185504 314 ntBASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.12□□□□□ -0.47
RpgrQ9R0X5 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms