Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Gm43962-201ENSMUST00000203898 190 ntBASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Gm18730-201ENSMUST00000218038 343 ntBASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Gm9630-201ENSMUST00000178304 885 ntBASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clcf1Q9QZM3 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clcf1Q9QZM3 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.81□□□□□ -0.68
Clcf1Q9QZM3 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clcf1Q9QZM3 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clcf1Q9QZM3 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clcf1Q9QZM3 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clcf1Q9QZM3 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clcf1Q9QZM3 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Clcf1Q9QZM3 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clcf1Q9QZM3 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clcf1Q9QZM3 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clcf1Q9QZM3 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Clcf1Q9QZM3 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clcf1Q9QZM3 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms