Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Upk3aQ9JKX8 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk3aQ9JKX8 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Upk3aQ9JKX8 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Upk3aQ9JKX8 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Upk3aQ9JKX8 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Upk3aQ9JKX8 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk3aQ9JKX8 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk3aQ9JKX8 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk3aQ9JKX8 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk3aQ9JKX8 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Upk3aQ9JKX8 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk3aQ9JKX8 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Upk3aQ9JKX8 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Gm12217-201ENSMUST00000118858 696 ntBASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Gm5982-201ENSMUST00000196234 512 ntBASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Gm2965-201ENSMUST00000198365 343 ntBASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Gm5363-201ENSMUST00000211927 938 ntBASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Gm21811-201ENSMUST00000096485 930 ntBASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk3aQ9JKX8 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Mir8093-201ENSMUST00000185043 137 ntBASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Gm5733-201ENSMUST00000190232 939 ntBASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Gm4482-201ENSMUST00000200876 742 ntBASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Gm6867-201ENSMUST00000219165 425 ntBASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk3aQ9JKX8 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 306.3 ms