Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Gm3671-201ENSMUST00000182463 1007 ntBASIC11.68□□□□□ -0.54
Rrp8Q9DB85 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rrp8Q9DB85 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.67□□□□□ -0.54
Rrp8Q9DB85 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Mir1956-201ENSMUST00000157748 65 ntBASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Gm12407-201ENSMUST00000180219 324 ntBASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Gm5706-201ENSMUST00000181525 993 ntBASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 AC124457.1-201ENSMUST00000198845 120 ntBASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Gm42657-201ENSMUST00000201746 211 ntBASIC11.67□□□□□ -0.54
Rrp8Q9DB85 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Gm19091-201ENSMUST00000208120 978 ntBASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Gm6108-201ENSMUST00000208365 367 ntBASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rrp8Q9DB85 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms