Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap53Q9D439 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap53Q9D439 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.09□□□□□ -0.31
Cfap53Q9D439 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.09□□□□□ -0.31
Cfap53Q9D439 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.09□□□□□ -0.31
Cfap53Q9D439 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.09□□□□□ -0.31
Cfap53Q9D439 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap53Q9D439 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.09□□□□□ -0.31
Cfap53Q9D439 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap53Q9D439 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap53Q9D439 Gm45428-201ENSMUST00000209619 1789 ntBASIC13.09□□□□□ -0.31
Cfap53Q9D439 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap53Q9D439 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap53Q9D439 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap53Q9D439 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Cfap53Q9D439 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cfap53Q9D439 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cfap53Q9D439 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Cfap53Q9D439 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Cfap53Q9D439 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.08□□□□□ -0.32
Cfap53Q9D439 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Gm13296-201ENSMUST00000117854 997 ntBASIC13.08□□□□□ -0.32
Cfap53Q9D439 Gm5419-201ENSMUST00000119301 527 ntBASIC13.08□□□□□ -0.32
Cfap53Q9D439 Gm13350-201ENSMUST00000120519 479 ntBASIC13.08□□□□□ -0.32
Cfap53Q9D439 Gm13665-201ENSMUST00000120830 528 ntBASIC13.08□□□□□ -0.32
Cfap53Q9D439 Gm12164-201ENSMUST00000121695 551 ntBASIC13.08□□□□□ -0.32
Cfap53Q9D439 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cfap53Q9D439 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Gm38317-201ENSMUST00000195564 343 ntBASIC13.08□□□□□ -0.32
Cfap53Q9D439 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.08□□□□□ -0.32
Cfap53Q9D439 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.08□□□□□ -0.32
Cfap53Q9D439 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC13.08□□□□□ -0.32
Cfap53Q9D439 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cfap53Q9D439 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.08□□□□□ -0.32
Cfap53Q9D439 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cfap53Q9D439 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cfap53Q9D439 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cfap53Q9D439 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cfap53Q9D439 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Cfap53Q9D439 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cfap53Q9D439 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cfap53Q9D439 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cfap53Q9D439 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cfap53Q9D439 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cfap53Q9D439 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cfap53Q9D439 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.07□□□□□ -0.32
Cfap53Q9D439 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cfap53Q9D439 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.07□□□□□ -0.32
Cfap53Q9D439 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cfap53Q9D439 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cfap53Q9D439 Gm7584-201ENSMUST00000175829 940 ntBASIC13.07□□□□□ -0.32
Cfap53Q9D439 AA914427-201ENSMUST00000193194 1166 ntBASIC13.07□□□□□ -0.32
Cfap53Q9D439 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cfap53Q9D439 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.07□□□□□ -0.32
Cfap53Q9D439 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.07□□□□□ -0.32
Cfap53Q9D439 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cfap53Q9D439 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.07□□□□□ -0.32
Cfap53Q9D439 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cfap53Q9D439 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cfap53Q9D439 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cfap53Q9D439 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.07□□□□□ -0.32
Cfap53Q9D439 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cfap53Q9D439 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cfap53Q9D439 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cfap53Q9D439 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cfap53Q9D439 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.06□□□□□ -0.32
Cfap53Q9D439 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cfap53Q9D439 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cfap53Q9D439 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.06□□□□□ -0.32
Cfap53Q9D439 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms