Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk1aQ9D132 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk1aQ9D132 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Upk1aQ9D132 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Upk1aQ9D132 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk1aQ9D132 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk1aQ9D132 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk1aQ9D132 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk1aQ9D132 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.24□□□□□ -0.61
Upk1aQ9D132 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.24□□□□□ -0.61
Upk1aQ9D132 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Gm13316-201ENSMUST00000140537 691 ntBASIC11.24□□□□□ -0.61
Upk1aQ9D132 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.24□□□□□ -0.61
Upk1aQ9D132 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Gm18893-201ENSMUST00000198416 943 ntBASIC11.24□□□□□ -0.61
Upk1aQ9D132 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Gm807-202ENSMUST00000224929 408 ntBASIC11.24□□□□□ -0.61
Upk1aQ9D132 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.24□□□□□ -0.61
Upk1aQ9D132 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.24□□□□□ -0.61
Upk1aQ9D132 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.24□□□□□ -0.61
Upk1aQ9D132 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.24□□□□□ -0.61
Upk1aQ9D132 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.24□□□□□ -0.61
Upk1aQ9D132 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.24□□□□□ -0.61
Upk1aQ9D132 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.24□□□□□ -0.61
Upk1aQ9D132 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.23□□□□□ -0.61
Upk1aQ9D132 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.23□□□□□ -0.61
Upk1aQ9D132 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Upk1aQ9D132 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Erich3-203ENSMUST00000189969 3460 ntBASIC11.23□□□□□ -0.61
Upk1aQ9D132 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Gm13226-201ENSMUST00000117838 404 ntBASIC11.23□□□□□ -0.61
Upk1aQ9D132 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.23□□□□□ -0.61
Upk1aQ9D132 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms