Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd1Q9D0E3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd1Q9D0E3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd1Q9D0E3 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.62□□□□□ -0.39
Lysmd1Q9D0E3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd1Q9D0E3 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd1Q9D0E3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd1Q9D0E3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd1Q9D0E3 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd1Q9D0E3 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd1Q9D0E3 Gm38246-201ENSMUST00000194318 1511 ntBASIC12.62□□□□□ -0.39
Lysmd1Q9D0E3 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lysmd1Q9D0E3 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Mir1249-201ENSMUST00000116791 98 ntBASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Gm12072-201ENSMUST00000118293 715 ntBASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Gm6939-201ENSMUST00000122029 864 ntBASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Gm14699-201ENSMUST00000122340 228 ntBASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Mir1941-201ENSMUST00000157834 83 ntBASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Gm24466-201ENSMUST00000179978 109 ntBASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Gm5205-201ENSMUST00000182253 1003 ntBASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Gm29651-201ENSMUST00000189088 697 ntBASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Gm32102-201ENSMUST00000196885 241 ntBASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Gm5996-201ENSMUST00000211110 718 ntBASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 AC134248.1-201ENSMUST00000216113 1176 ntBASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Gm8730-201ENSMUST00000076373 954 ntBASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Gm7061-201ENSMUST00000118127 1416 ntBASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lysmd1Q9D0E3 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd1Q9D0E3 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd1Q9D0E3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Lysmd1Q9D0E3 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd1Q9D0E3 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC12.6□□□□□ -0.39
Lysmd1Q9D0E3 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.6□□□□□ -0.39
Lysmd1Q9D0E3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd1Q9D0E3 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd1Q9D0E3 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd1Q9D0E3 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd1Q9D0E3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd1Q9D0E3 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd1Q9D0E3 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Lysmd1Q9D0E3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd1Q9D0E3 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd1Q9D0E3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd1Q9D0E3 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd1Q9D0E3 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd1Q9D0E3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd1Q9D0E3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.6□□□□□ -0.39
Lysmd1Q9D0E3 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Lysmd1Q9D0E3 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd1Q9D0E3 Mir704-201ENSMUST00000102106 77 ntBASIC12.6□□□□□ -0.39
Lysmd1Q9D0E3 Gm15610-201ENSMUST00000120584 195 ntBASIC12.6□□□□□ -0.39
Lysmd1Q9D0E3 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd1Q9D0E3 Gm16547-201ENSMUST00000159474 293 ntBASIC12.6□□□□□ -0.39
Lysmd1Q9D0E3 Mir7051-201ENSMUST00000184167 73 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms