Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snf8Q9CZ28 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.24□□□□□ -0.45
Snf8Q9CZ28 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.24□□□□□ -0.45
Snf8Q9CZ28 Gm2546-201ENSMUST00000182630 991 ntBASIC12.24□□□□□ -0.45
Snf8Q9CZ28 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.24□□□□□ -0.45
Snf8Q9CZ28 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Snf8Q9CZ28 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Snf8Q9CZ28 Gm43002-201ENSMUST00000200310 155 ntBASIC12.24□□□□□ -0.45
Snf8Q9CZ28 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.24□□□□□ -0.45
Snf8Q9CZ28 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Snf8Q9CZ28 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snf8Q9CZ28 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.24□□□□□ -0.45
Snf8Q9CZ28 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snf8Q9CZ28 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snf8Q9CZ28 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snf8Q9CZ28 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snf8Q9CZ28 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snf8Q9CZ28 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snf8Q9CZ28 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snf8Q9CZ28 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snf8Q9CZ28 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Snf8Q9CZ28 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snf8Q9CZ28 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Snf8Q9CZ28 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snf8Q9CZ28 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.24□□□□□ -0.45
Snf8Q9CZ28 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snf8Q9CZ28 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snf8Q9CZ28 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snf8Q9CZ28 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Snf8Q9CZ28 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Snf8Q9CZ28 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Gm11700-201ENSMUST00000119409 403 ntBASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Gm14832-201ENSMUST00000121289 322 ntBASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Snf8Q9CZ28 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Gm10434-201ENSMUST00000101158 471 ntBASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Mir1247-201ENSMUST00000116706 82 ntBASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Gm11439-201ENSMUST00000118598 409 ntBASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms