Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Gm11918-201ENSMUST00000121660 179 ntBASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Gm6244-201ENSMUST00000178732 841 ntBASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Gm9908-201ENSMUST00000211534 448 ntBASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Gm5356-201ENSMUST00000093326 615 ntBASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hdhd3Q9CYW4 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Hdhd3Q9CYW4 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Hdhd3Q9CYW4 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Hdhd3Q9CYW4 Erich3-203ENSMUST00000189969 3460 ntBASIC9.65□□□□□ -0.87
Hdhd3Q9CYW4 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Hdhd3Q9CYW4 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Hdhd3Q9CYW4 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.87
Hdhd3Q9CYW4 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Gm44152-201ENSMUST00000205007 1691 ntBASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Gm13736-201ENSMUST00000119272 253 ntBASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Gm25927-201ENSMUST00000175058 117 ntBASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 AC110817.1-201ENSMUST00000225706 605 ntBASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Gm6180-201ENSMUST00000065243 498 ntBASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Hdhd3Q9CYW4 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms