Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Gm25881-201ENSMUST00000157783 103 ntBASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Gm3332-201ENSMUST00000189337 928 ntBASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Gm43138-201ENSMUST00000199123 708 ntBASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Gm42599-201ENSMUST00000201308 469 ntBASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2ird2Q99NI3 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Gm12036-201ENSMUST00000120008 530 ntBASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Gm11450-201ENSMUST00000121144 333 ntBASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Gm12566-201ENSMUST00000121479 359 ntBASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Gm18753-201ENSMUST00000201000 566 ntBASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Gm7848-201ENSMUST00000210739 718 ntBASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Cog3-203ENSMUST00000227473 4197 ntBASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Gtf2ird2Q99NI3 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Map1b-203ENSMUST00000223725 2669 ntBASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Gm11509-201ENSMUST00000117358 325 ntBASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Gm13035-201ENSMUST00000117496 342 ntBASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Gm14724-201ENSMUST00000118400 537 ntBASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms