Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm13615-201ENSMUST00000120242 1612 ntBASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Gm13549-201ENSMUST00000118339 796 ntBASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Gm15004-201ENSMUST00000119192 630 ntBASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Gm5257-201ENSMUST00000121823 790 ntBASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Gm24844-201ENSMUST00000158679 127 ntBASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Gm4310-201ENSMUST00000177847 889 ntBASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Gm44552-201ENSMUST00000205458 1247 ntBASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Gm6722-201ENSMUST00000221586 390 ntBASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Gm4604-201ENSMUST00000025040 390 ntBASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Nkx6-1Q99MA9 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 Gm22711-201ENSMUST00000116890 133 ntBASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 Gm5419-201ENSMUST00000119301 527 ntBASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 Gm7959-201ENSMUST00000221823 1078 ntBASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.21□□□□□ -0.61
Nkx6-1Q99MA9 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx6-1Q99MA9 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx6-1Q99MA9 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx6-1Q99MA9 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx6-1Q99MA9 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Nkx6-1Q99MA9 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx6-1Q99MA9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms