Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.48□□□□□ -0.73
Scrt1Q99M85 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Gm25880-201ENSMUST00000104331 132 ntBASIC10.48□□□□□ -0.73
Scrt1Q99M85 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.48□□□□□ -0.73
Scrt1Q99M85 Gm11956-201ENSMUST00000119525 512 ntBASIC10.48□□□□□ -0.73
Scrt1Q99M85 Gm12899-201ENSMUST00000120565 551 ntBASIC10.48□□□□□ -0.73
Scrt1Q99M85 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Gm3332-201ENSMUST00000189337 928 ntBASIC10.48□□□□□ -0.73
Scrt1Q99M85 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Gm2517-201ENSMUST00000215651 348 ntBASIC10.48□□□□□ -0.73
Scrt1Q99M85 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC10.48□□□□□ -0.73
Scrt1Q99M85 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.48□□□□□ -0.73
Scrt1Q99M85 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Scrt1Q99M85 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.47□□□□□ -0.73
Scrt1Q99M85 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC10.47□□□□□ -0.73
Scrt1Q99M85 Gm3793-201ENSMUST00000204973 672 ntBASIC10.47□□□□□ -0.73
Scrt1Q99M85 Gm6905-201ENSMUST00000205729 511 ntBASIC10.47□□□□□ -0.73
Scrt1Q99M85 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Gm3028-201ENSMUST00000213805 1119 ntBASIC10.47□□□□□ -0.73
Scrt1Q99M85 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Gm26448-201ENSMUST00000082446 203 ntBASIC10.47□□□□□ -0.73
Scrt1Q99M85 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms