Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp11Q99K46 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp11Q99K46 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp11Q99K46 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp11Q99K46 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp11Q99K46 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp11Q99K46 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp11Q99K46 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp11Q99K46 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp11Q99K46 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.56□□□□□ -0.4
Usp11Q99K46 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Usp11Q99K46 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.56□□□□□ -0.4
Usp11Q99K46 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Usp11Q99K46 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Usp11Q99K46 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Usp11Q99K46 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp11Q99K46 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Usp11Q99K46 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Usp11Q99K46 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp11Q99K46 Gm27320-201ENSMUST00000184892 109 ntBASIC12.56□□□□□ -0.4
Usp11Q99K46 Gm3096-201ENSMUST00000185770 364 ntBASIC12.56□□□□□ -0.4
Usp11Q99K46 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.56□□□□□ -0.4
Usp11Q99K46 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.56□□□□□ -0.4
Usp11Q99K46 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.56□□□□□ -0.4
Usp11Q99K46 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp11Q99K46 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Usp11Q99K46 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp11Q99K46 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp11Q99K46 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Usp11Q99K46 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp11Q99K46 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp11Q99K46 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.56□□□□□ -0.4
Usp11Q99K46 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Usp11Q99K46 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Usp11Q99K46 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Usp11Q99K46 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Usp11Q99K46 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp11Q99K46 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Usp11Q99K46 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp11Q99K46 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Usp11Q99K46 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp11Q99K46 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.56□□□□□ -0.4
Usp11Q99K46 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Usp11Q99K46 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.55□□□□□ -0.4
Usp11Q99K46 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp11Q99K46 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp11Q99K46 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp11Q99K46 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp11Q99K46 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp11Q99K46 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.55□□□□□ -0.4
Usp11Q99K46 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp11Q99K46 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp11Q99K46 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.55□□□□□ -0.4
Usp11Q99K46 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp11Q99K46 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp11Q99K46 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Usp11Q99K46 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Usp11Q99K46 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.55□□□□□ -0.4
Usp11Q99K46 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp11Q99K46 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp11Q99K46 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp11Q99K46 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp11Q99K46 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.55□□□□□ -0.4
Usp11Q99K46 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Usp11Q99K46 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp11Q99K46 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.55□□□□□ -0.4
Usp11Q99K46 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp11Q99K46 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.55□□□□□ -0.4
Usp11Q99K46 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp11Q99K46 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.55□□□□□ -0.4
Usp11Q99K46 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.55□□□□□ -0.4
Usp11Q99K46 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp11Q99K46 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp11Q99K46 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Usp11Q99K46 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp11Q99K46 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp11Q99K46 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp11Q99K46 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.55□□□□□ -0.4
Usp11Q99K46 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Usp11Q99K46 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Usp11Q99K46 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp11Q99K46 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp11Q99K46 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Usp11Q99K46 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp11Q99K46 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Usp11Q99K46 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp11Q99K46 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp11Q99K46 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp11Q99K46 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp11Q99K46 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp11Q99K46 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp11Q99K46 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Usp11Q99K46 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp11Q99K46 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp11Q99K46 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp11Q99K46 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp11Q99K46 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp11Q99K46 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Usp11Q99K46 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp11Q99K46 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms