Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Gm20482-202ENSMUST00000174729 825 ntBASIC11.62□□□□□ -0.55
Pcdha8Q91Y12 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.62□□□□□ -0.55
Pcdha8Q91Y12 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdha8Q91Y12 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pcdha8Q91Y12 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.62□□□□□ -0.55
Pcdha8Q91Y12 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdha8Q91Y12 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.62□□□□□ -0.55
Pcdha8Q91Y12 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdha8Q91Y12 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Pcdha8Q91Y12 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdha8Q91Y12 Olfr582-201ENSMUST00000098212 960 ntBASIC11.62□□□□□ -0.55
Pcdha8Q91Y12 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdha8Q91Y12 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Pcdha8Q91Y12 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.62□□□□□ -0.55
Pcdha8Q91Y12 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.62□□□□□ -0.55
Pcdha8Q91Y12 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdha8Q91Y12 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdha8Q91Y12 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdha8Q91Y12 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdha8Q91Y12 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdha8Q91Y12 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdha8Q91Y12 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdha8Q91Y12 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.62□□□□□ -0.55
Pcdha8Q91Y12 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdha8Q91Y12 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Pcdha8Q91Y12 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdha8Q91Y12 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdha8Q91Y12 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Gm5070-201ENSMUST00000177599 862 ntBASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdha8Q91Y12 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms