Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Gm14832-201ENSMUST00000121289 322 ntBASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Gm38266-201ENSMUST00000194931 421 ntBASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Gm30285-201ENSMUST00000214614 422 ntBASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdhga3Q91XY5 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Gm25214-201ENSMUST00000104573 129 ntBASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Gm2991-201ENSMUST00000173338 480 ntBASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Gm6621-201ENSMUST00000193251 772 ntBASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Gm21769-201ENSMUST00000211922 111 ntBASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdhga3Q91XY5 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Pcdhga3Q91XY5 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pcdhga3Q91XY5 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pcdhga3Q91XY5 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pcdhga3Q91XY5 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.65□□□□□ -0.71
Pcdhga3Q91XY5 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pcdhga3Q91XY5 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.65□□□□□ -0.71
Pcdhga3Q91XY5 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcdhga3Q91XY5 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pcdhga3Q91XY5 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.64□□□□□ -0.71
Pcdhga3Q91XY5 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcdhga3Q91XY5 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Pcdhga3Q91XY5 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcdhga3Q91XY5 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.64□□□□□ -0.71
Pcdhga3Q91XY5 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.64□□□□□ -0.71
Pcdhga3Q91XY5 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcdhga3Q91XY5 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcdhga3Q91XY5 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.64□□□□□ -0.71
Pcdhga3Q91XY5 Gm14726-201ENSMUST00000120623 896 ntBASIC10.64□□□□□ -0.71
Pcdhga3Q91XY5 Gm15547-201ENSMUST00000122152 333 ntBASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms