Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
StrcQ8VIM6 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
StrcQ8VIM6 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
StrcQ8VIM6 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
StrcQ8VIM6 AC166361.2-201ENSMUST00000219269 1415 ntBASIC13.8□□□□□ -0.2
StrcQ8VIM6 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
StrcQ8VIM6 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
StrcQ8VIM6 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
StrcQ8VIM6 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.79□□□□□ -0.2
StrcQ8VIM6 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
StrcQ8VIM6 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
StrcQ8VIM6 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
StrcQ8VIM6 AC107763.1-201ENSMUST00000226082 1365 ntBASIC13.79□□□□□ -0.2
StrcQ8VIM6 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
StrcQ8VIM6 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
StrcQ8VIM6 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
StrcQ8VIM6 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
StrcQ8VIM6 Ighv13-1-201ENSMUST00000103480 294 ntBASIC13.79□□□□□ -0.2
StrcQ8VIM6 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
StrcQ8VIM6 Mir1249-201ENSMUST00000116791 98 ntBASIC13.79□□□□□ -0.2
StrcQ8VIM6 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
StrcQ8VIM6 Mir1941-201ENSMUST00000157834 83 ntBASIC13.79□□□□□ -0.2
StrcQ8VIM6 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
StrcQ8VIM6 Gm19246-201ENSMUST00000173599 255 ntBASIC13.79□□□□□ -0.2
StrcQ8VIM6 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC13.79□□□□□ -0.2
StrcQ8VIM6 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
StrcQ8VIM6 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
StrcQ8VIM6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
StrcQ8VIM6 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
StrcQ8VIM6 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
StrcQ8VIM6 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
StrcQ8VIM6 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.79□□□□□ -0.2
StrcQ8VIM6 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
StrcQ8VIM6 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
StrcQ8VIM6 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
StrcQ8VIM6 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.79□□□□□ -0.2
StrcQ8VIM6 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
StrcQ8VIM6 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.79□□□□□ -0.2
StrcQ8VIM6 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
StrcQ8VIM6 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
StrcQ8VIM6 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Gm15815-201ENSMUST00000120569 255 ntBASIC13.78□□□□□ -0.2
StrcQ8VIM6 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Gm44008-201ENSMUST00000204345 412 ntBASIC13.78□□□□□ -0.2
StrcQ8VIM6 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Wbp1-209ENSMUST00000205023 716 ntBASIC13.78□□□□□ -0.2
StrcQ8VIM6 Gm7589-201ENSMUST00000085631 534 ntBASIC13.78□□□□□ -0.2
StrcQ8VIM6 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Gm6478-201ENSMUST00000099450 742 ntBASIC13.78□□□□□ -0.2
StrcQ8VIM6 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.78□□□□□ -0.2
StrcQ8VIM6 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.78□□□□□ -0.2
StrcQ8VIM6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC13.78□□□□□ -0.2
StrcQ8VIM6 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Gm38233-201ENSMUST00000194259 807 ntBASIC13.78□□□□□ -0.2
StrcQ8VIM6 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Gm5040-201ENSMUST00000218609 800 ntBASIC13.78□□□□□ -0.2
StrcQ8VIM6 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
StrcQ8VIM6 AC121357.1-201ENSMUST00000227365 608 ntBASIC13.78□□□□□ -0.2
StrcQ8VIM6 AC158986.2-201ENSMUST00000227487 618 ntBASIC13.78□□□□□ -0.2
StrcQ8VIM6 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
StrcQ8VIM6 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
StrcQ8VIM6 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
StrcQ8VIM6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
StrcQ8VIM6 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
StrcQ8VIM6 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
StrcQ8VIM6 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
StrcQ8VIM6 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
StrcQ8VIM6 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
StrcQ8VIM6 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
StrcQ8VIM6 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
StrcQ8VIM6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms