Protein–RNA interactions for Protein: Q8VCI7

Swsap1, ATPase SWSAP1, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Swsap1Q8VCI7 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 BC043934-202ENSMUST00000185694 2356 ntBASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Gm11439-201ENSMUST00000118598 409 ntBASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Gm27341-201ENSMUST00000183570 106 ntBASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Gm9230-201ENSMUST00000188228 532 ntBASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Gm44262-201ENSMUST00000204969 372 ntBASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Gzmn-202ENSMUST00000225535 989 ntBASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Swsap1Q8VCI7 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Gm5070-201ENSMUST00000177599 862 ntBASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Gm9996-201ENSMUST00000070359 913 ntBASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Swsap1Q8VCI7 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Swsap1Q8VCI7 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Swsap1Q8VCI7 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Swsap1Q8VCI7 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.8□□□□□ -0.68
Swsap1Q8VCI7 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms