Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Gm5419-201ENSMUST00000119301 527 ntBASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Gm13875-201ENSMUST00000120162 282 ntBASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Gm6114-201ENSMUST00000182472 968 ntBASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Gm19994-201ENSMUST00000217086 586 ntBASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.65□□□□□ -0.7
Lysmd4Q8CC84 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Lysmd4Q8CC84 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.65□□□□□ -0.71
Lysmd4Q8CC84 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Lysmd4Q8CC84 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Lysmd4Q8CC84 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Lysmd4Q8CC84 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Lysmd4Q8CC84 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Lysmd4Q8CC84 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.65□□□□□ -0.71
Lysmd4Q8CC84 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.65□□□□□ -0.71
Lysmd4Q8CC84 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Lysmd4Q8CC84 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Lysmd4Q8CC84 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Lysmd4Q8CC84 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Gm9192-201ENSMUST00000183221 985 ntBASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Gm28882-201ENSMUST00000185504 314 ntBASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Lysmd4Q8CC84 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms