Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Gm16505-201ENSMUST00000179981 232 ntBASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Gm5363-201ENSMUST00000211927 938 ntBASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Gm43174-201ENSMUST00000195914 2445 ntBASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Gm43773-201ENSMUST00000198548 2162 ntBASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Gm42913-201ENSMUST00000197936 1853 ntBASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Gm15515-201ENSMUST00000117827 822 ntBASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Gm7857-201ENSMUST00000117957 358 ntBASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Gm12217-201ENSMUST00000118858 696 ntBASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Cd63-ps-202ENSMUST00000154992 717 ntBASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Gm17040-202ENSMUST00000170597 889 ntBASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Gm6114-201ENSMUST00000182472 968 ntBASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 CT485787.1-201ENSMUST00000225617 968 ntBASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 AC133602.1-201ENSMUST00000227510 509 ntBASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc60Q8C4J0 Gm43727-201ENSMUST00000198021 2647 ntBASIC15.14■□□□□ 0.01
Ccdc60Q8C4J0 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc60Q8C4J0 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc60Q8C4J0 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc60Q8C4J0 Gm18263-201ENSMUST00000220846 1928 ntBASIC15.14■□□□□ 0.01
Ccdc60Q8C4J0 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc60Q8C4J0 Gm12857-201ENSMUST00000117678 592 ntBASIC15.14■□□□□ 0.01
Ccdc60Q8C4J0 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Ccdc60Q8C4J0 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Ccdc60Q8C4J0 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc60Q8C4J0 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc60Q8C4J0 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Ccdc60Q8C4J0 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc60Q8C4J0 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc60Q8C4J0 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc60Q8C4J0 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc60Q8C4J0 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ccdc60Q8C4J0 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc60Q8C4J0 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc60Q8C4J0 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc60Q8C4J0 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc60Q8C4J0 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc60Q8C4J0 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms