Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Gm13786-201ENSMUST00000122371 333 ntBASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Gm27516-201ENSMUST00000184237 98 ntBASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Gm38158-201ENSMUST00000194617 339 ntBASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Gm43179-201ENSMUST00000198797 275 ntBASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.67□□□□□ -0.7
Rft1Q8C3B8 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Gm24526-201ENSMUST00000082921 158 ntBASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Olfr582-201ENSMUST00000098212 960 ntBASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rft1Q8C3B8 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Gm37489-201ENSMUST00000191883 159 ntBASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Gm38266-201ENSMUST00000194931 421 ntBASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Gm38092-201ENSMUST00000195600 653 ntBASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Gm9368-201ENSMUST00000219348 831 ntBASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Gm45930-201ENSMUST00000221330 292 ntBASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rft1Q8C3B8 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.65□□□□□ -0.7
Rft1Q8C3B8 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rft1Q8C3B8 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Rft1Q8C3B8 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rft1Q8C3B8 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rft1Q8C3B8 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rft1Q8C3B8 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Rft1Q8C3B8 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rft1Q8C3B8 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rft1Q8C3B8 Gm10434-201ENSMUST00000101158 471 ntBASIC10.65□□□□□ -0.7
Rft1Q8C3B8 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms