Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trub1Q8C0D0 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trub1Q8C0D0 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trub1Q8C0D0 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.27□□□□□ -0.45
Trub1Q8C0D0 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.27□□□□□ -0.45
Trub1Q8C0D0 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trub1Q8C0D0 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trub1Q8C0D0 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trub1Q8C0D0 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trub1Q8C0D0 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trub1Q8C0D0 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.26□□□□□ -0.45
Trub1Q8C0D0 Gm11660-201ENSMUST00000120955 412 ntBASIC12.26□□□□□ -0.45
Trub1Q8C0D0 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trub1Q8C0D0 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Gm11700-201ENSMUST00000119409 403 ntBASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Gm11960-201ENSMUST00000122068 925 ntBASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Gm38314-201ENSMUST00000195709 625 ntBASIC12.25□□□□□ -0.45
Trub1Q8C0D0 AY036118-201ENSMUST00000200021 923 ntBASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Gm44262-201ENSMUST00000204969 372 ntBASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.25□□□□□ -0.45
Trub1Q8C0D0 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trub1Q8C0D0 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms