Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Gm38117-201ENSMUST00000194653 939 ntBASIC9.77□□□□□ -0.84
Smg1Q8BKX6 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Smg1Q8BKX6 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.84
Smg1Q8BKX6 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smg1Q8BKX6 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC9.77□□□□□ -0.84
Smg1Q8BKX6 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smg1Q8BKX6 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smg1Q8BKX6 Ssr1-203ENSMUST00000225246 1825 ntBASIC9.77□□□□□ -0.84
Smg1Q8BKX6 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Ntrk2-208ENSMUST00000225583 2719 ntBASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Gm6158-201ENSMUST00000109467 904 ntBASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Gm8234-201ENSMUST00000198523 1107 ntBASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Mir341-201ENSMUST00000093593 96 ntBASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC9.77□□□□□ -0.85
Smg1Q8BKX6 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Gm43167-201ENSMUST00000202001 1606 ntBASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Gm11475-201ENSMUST00000118482 476 ntBASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Gm27444-201ENSMUST00000184157 137 ntBASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Gm29651-201ENSMUST00000189088 697 ntBASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Gm30946-201ENSMUST00000198288 724 ntBASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Gm2594-201ENSMUST00000214774 742 ntBASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Gm9487-201ENSMUST00000216600 472 ntBASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Gm10807-201ENSMUST00000177134 795 ntBASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 AC118639.2-201ENSMUST00000226289 223 ntBASIC9.76□□□□□ -0.85
Smg1Q8BKX6 AC154213.1-201ENSMUST00000228234 583 ntBASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smg1Q8BKX6 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smg1Q8BKX6 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smg1Q8BKX6 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Smg1Q8BKX6 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smg1Q8BKX6 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms