Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.09□□□□□ -0.79
Rif1Q6PR54 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rif1Q6PR54 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Gm8019-201ENSMUST00000119317 587 ntBASIC10.09□□□□□ -0.79
Rif1Q6PR54 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Rif1Q6PR54 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Rif1Q6PR54 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Rif1Q6PR54 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Gm24934-201ENSMUST00000103764 111 ntBASIC10.08□□□□□ -0.8
Rif1Q6PR54 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Gm25492-201ENSMUST00000157383 129 ntBASIC10.08□□□□□ -0.8
Rif1Q6PR54 Gm44216-201ENSMUST00000203942 157 ntBASIC10.08□□□□□ -0.8
Rif1Q6PR54 Gm9797-202ENSMUST00000218003 294 ntBASIC10.08□□□□□ -0.8
Rif1Q6PR54 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.08□□□□□ -0.8
Rif1Q6PR54 CT009546.1-201ENSMUST00000222573 1120 ntBASIC10.08□□□□□ -0.8
Rif1Q6PR54 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Gm2420-202ENSMUST00000202224 2249 ntBASIC10.08□□□□□ -0.8
Rif1Q6PR54 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Rif1Q6PR54 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Gm12179-201ENSMUST00000118344 1272 ntBASIC10.08□□□□□ -0.8
Rif1Q6PR54 Gm14395-201ENSMUST00000120494 563 ntBASIC10.08□□□□□ -0.8
Rif1Q6PR54 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC10.08□□□□□ -0.8
Rif1Q6PR54 Gm18367-201ENSMUST00000176139 600 ntBASIC10.08□□□□□ -0.8
Rif1Q6PR54 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Gm43966-201ENSMUST00000203301 612 ntBASIC10.08□□□□□ -0.8
Rif1Q6PR54 Gm6108-201ENSMUST00000208365 367 ntBASIC10.08□□□□□ -0.8
Rif1Q6PR54 AC154213.1-201ENSMUST00000228234 583 ntBASIC10.08□□□□□ -0.8
Rif1Q6PR54 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Gm17541-201ENSMUST00000080062 525 ntBASIC10.08□□□□□ -0.8
Rif1Q6PR54 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 AC154747.3-201ENSMUST00000224471 3470 ntBASIC10.08□□□□□ -0.8
Rif1Q6PR54 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms