Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Gm25007-201ENSMUST00000083808 133 ntBASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Gm13316-201ENSMUST00000140537 691 ntBASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Gm16379-201ENSMUST00000161469 348 ntBASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Gm8762-201ENSMUST00000193486 339 ntBASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Gm9996-201ENSMUST00000070359 913 ntBASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scaf4Q6PFF0 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Gm5419-201ENSMUST00000119301 527 ntBASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Gm9794-201ENSMUST00000202370 423 ntBASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Gm40466-201ENSMUST00000212174 422 ntBASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Gm19994-201ENSMUST00000217086 586 ntBASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Gm10254-201ENSMUST00000052888 867 ntBASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scaf4Q6PFF0 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.71□□□□□ -0.54
Scaf4Q6PFF0 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Scaf4Q6PFF0 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Scaf4Q6PFF0 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.71□□□□□ -0.54
Scaf4Q6PFF0 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms