Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Gm14723-201ENSMUST00000118686 215 ntBASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Sp140Q6NSQ5 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Gm15198-201ENSMUST00000117283 177 ntBASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Gm38241-201ENSMUST00000192641 898 ntBASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 AA914427-201ENSMUST00000193194 1166 ntBASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Rprl1-202ENSMUST00000198476 238 ntBASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Gm5455-201ENSMUST00000058710 715 ntBASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sp140Q6NSQ5 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms